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  5. LOC_Os02g03294.1

LOC_Os02g03294.1 (CYCP4;1, LOC_Os02g03294)


Aliases : CYCP4;1, LOC_Os02g03294

Description : cyclin (CYCP)


Gene families : OG0000303 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000303_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g03294.1
Cluster HCCA: Cluster_104

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00106p00124350 cycp3;1,... Cell cycle.regulation.cyclins.CYCP-type cyclin 0.03 OrthoFinder output from all 47 species
AT2G44740 CYCP4;1 cyclin p4;1 0.05 OrthoFinder output from all 47 species
AT2G45080 cycp3;1 cyclin p3;1 0.01 OrthoFinder output from all 47 species
AT3G05327 No alias Cyclin family protein 0.04 OrthoFinder output from all 47 species
AT3G60550 CYCP3;2 cyclin p3;2 0.03 OrthoFinder output from all 47 species
AT3G63120 CYCP1;1 cyclin p1;1 0.03 OrthoFinder output from all 47 species
AT5G61650 CYCP4;2, CYCP4 CYCLIN P4;2 0.03 OrthoFinder output from all 47 species
Adi_g006736 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Aev_g18881 CYCP2;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Ala_g03971 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Ala_g15122 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Ala_g16985 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Ala_g25698 CYCP2;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Ala_g36160 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g02320 CYCP2;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Als_g21897 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Aob_g07900 CYCP2;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Aop_g00597 CYCP2;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Aop_g05309 CYCP2;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Aop_g05761 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Aop_g11744 cycp3;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Aop_g14532 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Aspi01Gene04191.t1 CYCP2;1, Aspi01Gene04191 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene30001.t1 CYCP4;1, Aspi01Gene30001 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene38820.t1 CYCP4;1, Aspi01Gene38820 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene38824.t1 CYCP4;1, Aspi01Gene38824 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene48169.t1 CYCP2;1, Aspi01Gene48169 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene51759.t1 CYCP4;1, Aspi01Gene51759 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene58408.t1 CYCP2;1, Aspi01Gene58408 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0060.g034840 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.06 OrthoFinder output from all 47 species
Azfi_s0084.g039008 CYCP2;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Cba_g07393 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Cba_g10117 CYCP2;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Ceric.07G089000.1 CYCP3;2, Ceric.07G089000 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Ceric.07G089100.1 CYCP3;2, Ceric.07G089100 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Ceric.10G034800.1 CYCP2;1, Ceric.10G034800 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Ceric.17G024900.1 CYCP4;1, Ceric.17G024900 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Ceric.31G015200.1 CYCP3;2, Ceric.31G015200 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Dac_g01502 CYCP2;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Dac_g02043 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Dac_g04053 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Dac_g21403 cycp3;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Dac_g21404 cycp3;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Dcu_g07480 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Dcu_g42276 CYCP2;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Dde_g02131 CYCP2;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Dde_g07807 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Dde_g15368 CYCP2;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Ehy_g05568 cycp3;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Ehy_g06469 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Ehy_g11009 CYCP4;2, CYCP4 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01000045001 No alias Cell cycle.regulation.cyclins.CYCP-type cyclin 0.03 OrthoFinder output from all 47 species
GSVIVT01018304001 CYCP4;1 Cell cycle.regulation.cyclins.CYCP-type cyclin 0.03 OrthoFinder output from all 47 species
Gb_27223 CYCP3;2 cyclin (CYCP) 0.06 OrthoFinder output from all 47 species
Gb_39399 CYCP4;1 cyclin (CYCP) 0.03 OrthoFinder output from all 47 species
LOC_Os04g46660.1 cycp3;1, LOC_Os04g46660 cyclin (CYCP) 0.06 OrthoFinder output from all 47 species
LOC_Os10g41430.1 CYCP4;1, LOC_Os10g41430 cyclin (CYCP) 0.04 OrthoFinder output from all 47 species
Len_g08941 cycp3;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Lfl_g16742 cycp3;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
MA_10430367g0010 CYCP2;1 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10435168g0020 CYCP3;2 cyclin (CYCP) 0.03 OrthoFinder output from all 47 species
MA_57087g0010 cycp3;1 cyclin (CYCP) 0.04 OrthoFinder output from all 47 species
Msp_g00510 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Msp_g05627 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Ore_g08217 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Ore_g22726 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.08 OrthoFinder output from all 47 species
Ore_g24433 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Ore_g28947 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.08 OrthoFinder output from all 47 species
Pir_g09300 cycp3;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Pir_g16206 CYCP2;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Pnu_g10155 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Ppi_g00643 CYCP2;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Ppi_g07325 CYCP3;2 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Ppi_g13236 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.06 OrthoFinder output from all 47 species
Ppi_g29737 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Ppi_g62553 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0019.g007745 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0217.g026066 cycp3;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Sam_g05185 No alias regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Sam_g12163 No alias regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Sam_g16477 No alias regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Solyc01g089850.4.1 CYCP4;1, Solyc01g089850 cyclin (CYCP) 0.04 OrthoFinder output from all 47 species
Solyc01g090800.3.1 CYCP3;2, Solyc01g090800 cyclin (CYCP) 0.02 OrthoFinder output from all 47 species
Solyc03g093790.3.1 CYCP4;1, Solyc03g093790 cyclin (CYCP) 0.06 OrthoFinder output from all 47 species
Solyc07g052610.3.1 CYCP2;1, Solyc07g052610 cyclin (CYCP) 0.04 OrthoFinder output from all 47 species
Spa_g03908 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Spa_g16879 CYCP3;2 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Spa_g17025 CYCP2;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Spa_g39740 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Spa_g47429 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Tin_g19076 CYCP2;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Tin_g27209 cycp3;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.06 OrthoFinder output from all 47 species
Tin_g28471 CYCP4;1 regulatory protein *(CYCP(CYCU) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Zm00001e007314_P001 cycp3;1, Zm00001e007314 cyclin (CYCP) 0.07 OrthoFinder output from all 47 species
Zm00001e007371_P002 CYCP4;3, Zm00001e007371 cyclin (CYCP) 0.03 OrthoFinder output from all 47 species
Zm00001e015290_P001 CYCP4;3, Zm00001e015290 cyclin (CYCP) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEA Interproscan
MF GO:0019901 protein kinase binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
InterPro domains Description Start Stop
IPR013922 Cyclin_PHO80-like 48 175
No external refs found!