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  5. LOC_Os02g08190.1

LOC_Os02g08190.1 (LOC_Os02g08190)


Aliases : LOC_Os02g08190

Description : Protein CYPRO4 OS=Cynara cardunculus (sp|p40781|cypr4_cynca : 689.0)


Gene families : OG0002427 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002427_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g08190.1
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
AT4G33400 No alias Vacuolar import/degradation, Vid27-related protein 0.17 OrthoFinder output from all 47 species
Ala_g23497 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Als_g12821 No alias not classified & original description: none 0.14 OrthoFinder output from all 47 species
Aop_g00721 No alias not classified & original description: none 0.13 OrthoFinder output from all 47 species
Aspi01Gene00286.t1 Aspi01Gene00286 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0261.g060766 No alias not classified & original description: CDS=317-2245 0.08 OrthoFinder output from all 47 species
Ceric.22G002700.1 Ceric.22G002700 not classified & original description: pacid=50615126... 0.15 OrthoFinder output from all 47 species
Cre16.g657550 No alias Protein CYPRO4 OS=Cynara cardunculus 0.01 OrthoFinder output from all 47 species
Dcu_g09878 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
GSVIVT01009497001 No alias Protein CYPRO4 OS=Cynara cardunculus 0.21 OrthoFinder output from all 47 species
Len_g12390 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Lfl_g37219 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
MA_12899g0010 No alias Protein CYPRO4 OS=Cynara cardunculus... 0.13 OrthoFinder output from all 47 species
Msp_g32123 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g02206 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g19394 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Solyc04g078940.3.1 Solyc04g078940 Protein CYPRO4 OS=Cynara cardunculus... 0.12 OrthoFinder output from all 47 species
Spa_g13061 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g04658 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Zm00001e013808_P001 Zm00001e013808 Protein CYPRO4 OS=Cynara cardunculus... 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
CC GO:0000775 chromosome, centromeric region IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
BP GO:0007059 chromosome segregation IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0045132 meiotic chromosome segregation IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0098687 chromosomal region IEP HCCA
BP GO:0098813 nuclear chromosome segregation IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1903046 meiotic cell cycle process IEP HCCA
InterPro domains Description Start Stop
IPR013863 VID27_C 281 594
No external refs found!