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  5. LOC_Os02g10200.1

LOC_Os02g10200.1 (LOC_Os02g10200)


Aliases : LOC_Os02g10200

Description : Zinc finger A20 and AN1 domain-containing stress-associated protein 4 OS=Oryza sativa subsp. japonica (sp|q6h7p8|sap4_orysj : 295.0)


Gene families : OG0000144 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000144_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g10200.1
Cluster HCCA: Cluster_75

Target Alias Description ECC score Gene Family Method Actions
AT1G51200 No alias A20/AN1-like zinc finger family protein 0.03 OrthoFinder output from all 47 species
AT4G12040 No alias A20/AN1-like zinc finger family protein 0.03 OrthoFinder output from all 47 species
AT4G22820 No alias A20/AN1-like zinc finger family protein 0.04 OrthoFinder output from all 47 species
Adi_g046889 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g112620 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g36075 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g06223 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0063.g035363 No alias not classified & original description: CDS=1-534 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021489.30 No alias Zinc finger A20 and AN1 domain-containing... 0.01 OrthoFinder output from all 47 species
Dcu_g31604 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g22316 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g21218 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g29224 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000073 No alias not classified & original description: CDS=1-585 0.02 OrthoFinder output from all 47 species
Spa_g05140 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g52045 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0015035 protein-disulfide reductase activity IEP HCCA
MF GO:0015036 disulfide oxidoreductase activity IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
InterPro domains Description Start Stop
IPR000058 Znf_AN1 114 150
IPR002653 Znf_A20 15 38
No external refs found!