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  5. LOC_Os02g10530.1

LOC_Os02g10530.1 (LOC_Os02g10530)


Aliases : LOC_Os02g10530

Description : no hits & (original description: none)


Gene families : OG0000423 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000423_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g10530.1
Cluster HCCA: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
AT2G04220 No alias Plant protein of unknown function (DUF868) 0.03 OrthoFinder output from all 47 species
AT5G48270 No alias Plant protein of unknown function (DUF868) 0.04 OrthoFinder output from all 47 species
Als_g01889 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g07822 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0003.g007556 No alias not classified & original description: CDS=1-1002 0.02 OrthoFinder output from all 47 species
Cba_g31493 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.1Z026300.1 Ceric.1Z026300 not classified & original description: pacid=50582267... 0.04 OrthoFinder output from all 47 species
Dac_g02747 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01030131001 No alias No description available 0.08 OrthoFinder output from all 47 species
Lfl_g01720 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g00485 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g11190 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001399 No alias not classified & original description: CDS=1-1068 0.03 OrthoFinder output from all 47 species
Solyc03g121220.2.1 Solyc03g121220 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Spa_g18036 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g00730 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP HCCA
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009606 tropism IEP HCCA
BP GO:0010274 hydrotropism IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016161 beta-amylase activity IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
InterPro domains Description Start Stop
IPR008586 DUF868_pln 58 294
No external refs found!