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  5. LOC_Os02g14929.1

LOC_Os02g14929.1 (LOC_Os02g14929)


Aliases : LOC_Os02g14929

Description : CCT3 subunit gamma of CCT chaperonin folding complex


Gene families : OG0005075 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005075_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: LOC_Os02g14929.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00176500 evm_27.TU.AmTr_v1... Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.03 OrthoFinder output from all 47 species
AT5G26360 No alias TCP-1/cpn60 chaperonin family protein 0.05 OrthoFinder output from all 47 species
Aev_g01274 No alias subunit gamma *(CCT3) of CCT chaperonin folding complex... 0.03 OrthoFinder output from all 47 species
Aop_g13024 No alias subunit gamma *(CCT3) of CCT chaperonin folding complex... 0.05 OrthoFinder output from all 47 species
Aspi01Gene14726.t1 Aspi01Gene14726 subunit gamma *(CCT3) of CCT chaperonin folding complex... 0.02 OrthoFinder output from all 47 species
Ceric.25G052600.1 Ceric.25G052600 subunit gamma *(CCT3) of CCT chaperonin folding complex... 0.02 OrthoFinder output from all 47 species
Cre10.g443250 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.05 OrthoFinder output from all 47 species
Dac_g00874 No alias subunit gamma *(CCT3) of CCT chaperonin folding complex... 0.02 OrthoFinder output from all 47 species
Dcu_g06317 No alias subunit gamma *(CCT3) of CCT chaperonin folding complex... 0.03 OrthoFinder output from all 47 species
Ehy_g01411 No alias subunit gamma *(CCT3) of CCT chaperonin folding complex... 0.02 OrthoFinder output from all 47 species
GSVIVT01000266001 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.05 OrthoFinder output from all 47 species
GSVIVT01007770001 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.11 OrthoFinder output from all 47 species
Gb_37345 No alias CCT3 subunit gamma of CCT chaperonin folding complex 0.07 OrthoFinder output from all 47 species
Len_g00631 No alias subunit gamma *(CCT3) of CCT chaperonin folding complex... 0.03 OrthoFinder output from all 47 species
Solyc05g056310.3.1 Solyc05g056310 CCT3 subunit gamma of CCT chaperonin folding complex 0.05 OrthoFinder output from all 47 species
Spa_g00971 No alias subunit gamma *(CCT3) of CCT chaperonin folding complex... 0.04 OrthoFinder output from all 47 species
Zm00001e000822_P001 Zm00001e000822 CCT3 subunit gamma of CCT chaperonin folding complex 0.05 OrthoFinder output from all 47 species
Zm00001e024916_P001 Zm00001e024916 CCT3 subunit gamma of CCT chaperonin folding complex 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000149 SNARE binding IEP HCCA
MF GO:0005484 SNAP receptor activity IEP HCCA
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0019905 syntaxin binding IEP HCCA
MF GO:0030674 protein-macromolecule adaptor activity IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
MF GO:0060090 molecular adaptor activity IEP HCCA
InterPro domains Description Start Stop
IPR002423 Cpn60/GroEL/TCP-1 33 526
No external refs found!