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  5. LOC_Os02g17110.1

LOC_Os02g17110.1 (LOC_Os02g17110)


Aliases : LOC_Os02g17110

Description : no hits & (original description: none)


Gene families : OG0000166 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000166_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g17110.1
Cluster HCCA: Cluster_97

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g03590.1 LOC_Os01g03590 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os01g18260.1 LOC_Os01g18260 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os01g19960.1 LOC_Os01g19960 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os01g24510.1 LOC_Os01g24510 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os01g24530.1 LOC_Os01g24530 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g33630.1 LOC_Os01g33630 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os01g38810.1 LOC_Os01g38810 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os02g25370.1 LOC_Os02g25370 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os02g25560.1 LOC_Os02g25560 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os02g51230.1 LOC_Os02g51230 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os02g56780.1 LOC_Os02g56780 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os04g11410.1 LOC_Os04g11410 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os04g20450.1 LOC_Os04g20450 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os04g26410.1 LOC_Os04g26410 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os04g28650.1 LOC_Os04g28650 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os05g03950.1 LOC_Os05g03950 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os05g16580.1 LOC_Os05g16580 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os05g18990.1 LOC_Os05g18990 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os05g26100.1 LOC_Os05g26100 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os05g27034.1 LOC_Os05g27034 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os05g27130.1 LOC_Os05g27130 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os05g39460.1 LOC_Os05g39460 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os05g50880.1 LOC_Os05g50880 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os06g10380.1 LOC_Os06g10380 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os06g19310.1 LOC_Os06g19310 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os06g21150.1 LOC_Os06g21150 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os06g35350.1 LOC_Os06g35350 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os06g42580.1 LOC_Os06g42580 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os07g03440.1 LOC_Os07g03440 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os07g26070.1 LOC_Os07g26070 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os07g46120.1 LOC_Os07g46120 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os08g04850.1 LOC_Os08g04850 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os08g11300.1 LOC_Os08g11300 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os08g12280.1 LOC_Os08g12280 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os08g17120.1 LOC_Os08g17120 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os08g24250.1 LOC_Os08g24250 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os08g26280.1 LOC_Os08g26280 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os09g14260.1 LOC_Os09g14260 Glutathione S-transferase T3 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
LOC_Os10g29010.1 LOC_Os10g29010 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os10g33480.1 LOC_Os10g33480 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os11g14350.1 LOC_Os11g14350 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os11g35762.1 LOC_Os11g35762 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os11g41050.1 LOC_Os11g41050 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os11g44100.1 LOC_Os11g44100 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os12g01870.1 LOC_Os12g01870 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os12g03020.1 LOC_Os12g03020 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os12g11600.1 LOC_Os12g11600 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os12g13080.1 LOC_Os12g13080 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os12g14200.1 LOC_Os12g14200 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os12g14820.1 LOC_Os12g14820 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os12g25300.1 LOC_Os12g25300 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os12g33060.1 PIN5, LOC_Os12g33060 auxin transporter (PIN). auxin efflux transporter (PIN) 0.04 OrthoFinder output from all 47 species
LOC_Os12g36480.1 LOC_Os12g36480 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEA Interproscan
MF GO:0008234 cysteine-type peptidase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP HCCA
InterPro domains Description Start Stop
IPR003653 Peptidase_C48_C 849 963
No external refs found!