LOC_Os02g18670.1 (ABCC3, ATMRP3, MRP3,...)

Aliases : ABCC3, ATMRP3, MRP3, LOC_Os02g18670

Description : subfamily ABCC transporter

Gene families : OG0000037 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os02g18670.1
Cluster	HCCA: Cluster_153

Target	Alias	Description	ECC score	Gene Family Method
Azfi_s0043.g027023	ATABCC5, MRP5,...	subfamily ABCC transporter & original description: CDS=79-4665	0.02	OrthoFinder output from all 47 species
Dac_g08766	AtABCC2, ABCC2,...	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g09221	MRP10, ATMRP10, ABCC14	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Gb_12836	ATMRP14, ABCC10, MRP14	ABC transporter C family member 10 OS=Arabidopsis...	0.01	OrthoFinder output from all 47 species
Gb_30373	ATMRP14, ABCC10, MRP14	ABC transporter C family member 10 OS=Arabidopsis...	0.01	OrthoFinder output from all 47 species
LOC_Os06g08560.1	MRP11, ABCC13,...	subfamily ABCC transporter	0.03	OrthoFinder output from all 47 species
Len_g24237	MRP10, ATMRP10, ABCC14	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g05010	EST3, MRP4, ATMRP4, ABCC4	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g19160	ATABCC5, MRP5,...	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g54907	MRP9, ABCC9, ATMRP9	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000723	telomere maintenance	IEP	HCCA
MF	GO:0003678	DNA helicase activity	IEP	HCCA
BP	GO:0006553	lysine metabolic process	IEP	HCCA
BP	GO:0008652	amino acid biosynthetic process	IEP	HCCA
MF	GO:0008839	4-hydroxy-tetrahydrodipicolinate reductase	IEP	HCCA
BP	GO:0009066	aspartate family amino acid metabolic process	IEP	HCCA
BP	GO:0009067	aspartate family amino acid biosynthetic process	IEP	HCCA
BP	GO:0009085	lysine biosynthetic process	IEP	HCCA
BP	GO:0009089	lysine biosynthetic process via diaminopimelate	IEP	HCCA
MF	GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors	IEP	HCCA
MF	GO:0016628	oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	IEP	HCCA
BP	GO:0032200	telomere organization	IEP	HCCA
MF	GO:0043531	ADP binding	IEP	HCCA
BP	GO:0043648	dicarboxylic acid metabolic process	IEP	HCCA
BP	GO:0046451	diaminopimelate metabolic process	IEP	HCCA
BP	GO:1901605	alpha-amino acid metabolic process	IEP	HCCA
BP	GO:1901607	alpha-amino acid biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR011527	ABC1_TM_dom	709	871
IPR011527	ABC1_TM_dom	174	316
IPR003439	ABC_transporter-like_ATP-bd	961	1109
IPR003439	ABC_transporter-like_ATP-bd	381	515

External Links

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LOC_Os02g18670.1 (ABCC3, ATMRP3, MRP3,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation