Aliases : LOC_Os02g19860
Description : Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 OS=Arabidopsis thaliana (sp|q38953|deah5_arath : 1675.0)
Gene families : OG0000184 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000184_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00025p00202360 | evm_27.TU.AmTr_v1... | Probable pre-mRNA-splicing factor ATP-dependent RNA... | 0.03 | OrthoFinder output from all 47 species | |
| AT1G26370 | No alias | RNA helicase family protein | 0.04 | OrthoFinder output from all 47 species | |
| AT1G32490 | ESP3, EMB2733 | RNA helicase family protein | 0.04 | OrthoFinder output from all 47 species | |
| AT2G35340 | MEE29 | helicase domain-containing protein | 0.04 | OrthoFinder output from all 47 species | |
| AT4G18465 | No alias | RNA helicase family protein | 0.03 | OrthoFinder output from all 47 species | |
| AT5G13010 | EMB3011 | RNA helicase family protein | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g008210 | ESP3, EMB2733 | RNA helicase *(Prp2) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g014958 | EMB3011 | RNA helicase *(Prp16) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g01897 | No alias | RNA helicase *(Prp22) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g11041 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g19131 | EMB3011 | RNA helicase *(Prp16) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g29988 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g13922 | EMB3011 | RNA helicase *(Prp16) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g64809 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g07013 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g13014 | EMB3011 | RNA helicase *(Prp16) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g35146 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.01G059500.1 | Ceric.01G059500 | not classified & original description: pacid=50591809... | 0.08 | OrthoFinder output from all 47 species | |
| Ceric.04G078700.1 | Ceric.04G078700 | not classified & original description: pacid=50630845... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.15G036900.1 | Ceric.15G036900 | RNA helicase *(Prp22) & original description:... | 0.05 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000984.27 | ESP3, EMB2733 | Pre-mRNA-splicing factor ATP-dependent RNA helicase... | 0.01 | OrthoFinder output from all 47 species | |
| Cre07.g349100 | ESP3, EMB2733 | RNA processing.RNA splicing.spliceosome... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g16924 | ESP3, EMB2733 | RNA helicase *(Prp2) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g20233 | EMB3011 | RNA helicase *(Prp16) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g30923 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g09304 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g22606 | EMB3011 | RNA helicase *(Prp16) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01007911001 | ESP3, EMB2733 | Pre-mRNA-splicing factor ATP-dependent RNA helicase... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01029863001 | No alias | Probable pre-mRNA-splicing factor ATP-dependent RNA... | 0.07 | OrthoFinder output from all 47 species | |
| Gb_14270 | No alias | Probable pre-mRNA-splicing factor ATP-dependent RNA... | 0.06 | OrthoFinder output from all 47 species | |
| Gb_22388 | No alias | helicase Prp43 of Intron-Lariat Spliceosome complex | 0.04 | OrthoFinder output from all 47 species | |
| Gb_30670 | No alias | helicase Prp43 of Intron-Lariat Spliceosome complex | 0.03 | OrthoFinder output from all 47 species | |
| Len_g09738 | ESP3, EMB2733 | RNA helicase *(Prp2) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g13066 | EMB3011 | RNA helicase *(Prp16) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| MA_277016g0010 | ESP3, EMB2733 | RNA helicase (Prp2) | 0.03 | OrthoFinder output from all 47 species | |
| MA_34468g0010 | No alias | helicase Prp43 of Intron-Lariat Spliceosome complex | 0.02 | OrthoFinder output from all 47 species | |
| MA_629782g0010 | EMB3011 | Pre-mRNA-splicing factor ATP-dependent RNA helicase... | 0.04 | OrthoFinder output from all 47 species | |
| Mp1g21130.1 | No alias | helicase Prp43 of Intron-Lariat Spliceosome complex | 0.02 | OrthoFinder output from all 47 species | |
| Mp2g13680.1 | No alias | Probable pre-mRNA-splicing factor ATP-dependent RNA... | 0.04 | OrthoFinder output from all 47 species | |
| Mp4g16380.1 | ESP3, EMB2733 | RNA helicase (Prp2) | 0.03 | OrthoFinder output from all 47 species | |
| Mp7g03460.1 | EMB3011 | RNA helicase (Prp16) | 0.07 | OrthoFinder output from all 47 species | |
| Nbi_g07572 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g21732 | ESP3, EMB2733 | RNA helicase *(Prp2) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g10443 | ESP3, EMB2733 | RNA helicase *(Prp2) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g42980 | EMB3011 | RNA helicase *(Prp16) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ore_g42990 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Pir_g07808 | No alias | RNA helicase Prp43 of Intron-Lariat Spliceosome complex... | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g26832 | No alias | RNA helicase Prp43 of Intron-Lariat Spliceosome complex... | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g04698 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ppi_g05341 | EMB3011 | RNA helicase *(Prp16) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g47387 | ESP3, EMB2733 | RNA helicase *(Prp2) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0002.g001017 | No alias | RNA helicase Prp43 of Intron-Lariat Spliceosome complex... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0047.g013414 | EMB3011 | RNA helicase *(Prp16) & original description: CDS=171-3614 | 0.07 | OrthoFinder output from all 47 species | |
| Sam_g14599 | No alias | RNA helicase *(Prp16) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g16290 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g16823 | No alias | RNA helicase Prp43 of Intron-Lariat Spliceosome complex... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g25079 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g29503 | No alias | RNA helicase *(Prp22) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Smo82212 | ESP3, EMB2733 | RNA processing.RNA splicing.spliceosome... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc03g115390.4.1 | ESP3, EMB2733,... | RNA helicase (Prp2) | 0.05 | OrthoFinder output from all 47 species | |
| Solyc07g039550.4.1 | Solyc07g039550 | Probable pre-mRNA-splicing factor ATP-dependent RNA... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc10g076910.2.1 | EMB3011, Solyc10g076910 | RNA helicase (Prp16) | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g25913 | EMB3011 | RNA helicase *(Prp16) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g01282 | EMB3011 | RNA helicase *(Prp16) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Tin_g02893 | ESP3, EMB2733 | RNA helicase *(Prp2) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g31207 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e001487_P003 | Zm00001e001487 | helicase Prp43 of Intron-Lariat Spliceosome complex | 0.1 | OrthoFinder output from all 47 species | |
| Zm00001e014112_P001 | Zm00001e014112 | Probable pre-mRNA-splicing factor ATP-dependent RNA... | 0.11 | OrthoFinder output from all 47 species | |
| Zm00001e022095_P001 | ESP3, EMB2733,... | RNA helicase (Prp2) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e036358_P005 | Zm00001e036358 | Probable pre-mRNA-splicing factor ATP-dependent RNA... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e038305_P001 | Zm00001e038305 | helicase Prp43 of Intron-Lariat Spliceosome complex | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
| MF | GO:0004386 | helicase activity | IEA | Interproscan |
| MF | GO:0005524 | ATP binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | IEP | HCCA |
| BP | GO:0006479 | protein methylation | IEP | HCCA |
| MF | GO:0008170 | N-methyltransferase activity | IEP | HCCA |
| BP | GO:0008213 | protein alkylation | IEP | HCCA |
| MF | GO:0008276 | protein methyltransferase activity | IEP | HCCA |
| MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | HCCA |
| MF | GO:0016278 | lysine N-methyltransferase activity | IEP | HCCA |
| MF | GO:0016279 | protein-lysine N-methyltransferase activity | IEP | HCCA |
| BP | GO:0016570 | histone modification | IEP | HCCA |
| BP | GO:0016571 | histone methylation | IEP | HCCA |
| BP | GO:0018022 | peptidyl-lysine methylation | IEP | HCCA |
| MF | GO:0018024 | histone lysine N-methyltransferase activity | IEP | HCCA |
| BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
| BP | GO:0018205 | peptidyl-lysine modification | IEP | HCCA |
| BP | GO:0032259 | methylation | IEP | HCCA |
| BP | GO:0034968 | histone lysine methylation | IEP | HCCA |
| MF | GO:0042054 | histone methyltransferase activity | IEP | HCCA |
| BP | GO:0043414 | macromolecule methylation | IEP | HCCA |
| No external refs found! |
