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  5. LOC_Os02g31850.1

LOC_Os02g31850.1 (FRS5, LOC_Os02g31850)


Aliases : FRS5, LOC_Os02g31850

Description : transcription factor (FAR1)


Gene families : OG0012282 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0012282_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g31850.1

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g37310.1 LOC_Os01g37310 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os01g63030.1 FRS5, LOC_Os01g63030 transcription factor (FAR1) 0.09 OrthoFinder output from all 47 species
LOC_Os05g39480.1 FRS5, LOC_Os05g39480 transcription factor (FAR1) 0.06 OrthoFinder output from all 47 species
LOC_Os11g17430.1 FRS5, LOC_Os11g17430 transcription factor (FAR1) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
InterPro domains Description Start Stop
IPR004330 FAR1_DNA_bnd_dom 65 143
IPR007527 Znf_SWIM 489 519
IPR018289 MULE_transposase_dom 231 296
No external refs found!