Aliases : LWD1, ATAN11, LOC_Os02g32430
Description : WD repeat-containing protein LWD1 OS=Arabidopsis thaliana (sp|q9lpv9|lwd1_arath : 499.0)
Gene families : OG0002975 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002975_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: LOC_Os02g32430.1 | |
| Cluster | HCCA: Cluster_142 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00001p00271900 | LWD1, ATAN11,... | Multi-process regulation.circadian clock.morning element... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00016p00252480 | LWD1, ATAN11,... | Multi-process regulation.circadian clock.morning element... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g047445 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g01547 | LWD1, ATAN11 | circadian clock activation factor *(LWD) & original... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os02g45810.1 | ATTTG1, TTG,... | Protein TRANSPARENT TESTA GLABRA 1 OS=Arabidopsis... | 0.05 | OrthoFinder output from all 47 species | |
| Pir_g36822 | LWD2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g01914 | LWD1, ATAN11 | circadian clock activation factor *(LWD) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e014684_P001 | LWD1, ATAN11,... | WD repeat-containing protein LWD1 OS=Arabidopsis... | 0.08 | OrthoFinder output from all 47 species | |
| Zm00001e015450_P001 | ATTTG1, TTG,... | Protein TRANSPARENT TESTA GLABRA 1 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| MF | GO:0061630 | ubiquitin protein ligase activity | IEP | HCCA |
| MF | GO:0061659 | ubiquitin-like protein ligase activity | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
| No external refs found! |
