LOC_Os02g34840.1 (KIWI, LOC_Os02g34840)

Aliases : KIWI, LOC_Os02g34840

Description : RNA polymerase II transcriptional coactivator KIWI OS=Arabidopsis thaliana (sp|o65154|kiwi_arath : 84.3)

Gene families : OG0001404 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001404_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os02g34840.1
Cluster	HCCA: Cluster_26

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00017p00247550	KIWI,...	RNA polymerase II transcriptional coactivator KIWI...	0.04	OrthoFinder output from all 47 species
Adi_g010168	KIWI	transcriptional co-activator *(KIWI/KELP) involved in...	0.03	OrthoFinder output from all 47 species
Adi_g019926	KELP	transcriptional co-activator *(KIWI/KELP) involved in...	0.03	OrthoFinder output from all 47 species
Als_g62598	KIWI	transcriptional co-activator *(KIWI/KELP) involved in...	0.02	OrthoFinder output from all 47 species
Mp2g17130.1	KIWI	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Msp_g35890	KIWI	transcriptional co-activator *(KIWI/KELP) involved in...	0.03	OrthoFinder output from all 47 species
Nbi_g41658	KELP	transcriptional co-activator *(KIWI/KELP) involved in...	0.02	OrthoFinder output from all 47 species
Ore_g11688	KIWI	transcriptional co-activator *(KIWI/KELP) involved in...	0.02	OrthoFinder output from all 47 species
Solyc02g061790.4.1	KIWI, Solyc02g061790	RNA polymerase II transcriptional coactivator KIWI...	0.02	OrthoFinder output from all 47 species
Tin_g03042	KELP	transcriptional co-activator *(KIWI/KELP) involved in...	0.02	OrthoFinder output from all 47 species
Zm00001e014805_P001	KIWI, Zm00001e014805	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Zm00001e028142_P001	KELP, Zm00001e028142	RNA polymerase II transcriptional coactivator KELP...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000123	histone acetyltransferase complex	IEP	HCCA
MF	GO:0003712	transcription coregulator activity	IEP	HCCA
CC	GO:0005575	cellular_component	IEP	HCCA
BP	GO:0006357	regulation of transcription by RNA polymerase II	IEP	HCCA
BP	GO:0008380	RNA splicing	IEP	HCCA
BP	GO:0009059	macromolecule biosynthetic process	IEP	HCCA
BP	GO:0016070	RNA metabolic process	IEP	HCCA
CC	GO:0016592	mediator complex	IEP	HCCA
CC	GO:0031248	protein acetyltransferase complex	IEP	HCCA
CC	GO:0032991	protein-containing complex	IEP	HCCA
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	HCCA
CC	GO:0035145	exon-exon junction complex	IEP	HCCA
CC	GO:0043189	H4/H2A histone acetyltransferase complex	IEP	HCCA
BP	GO:0044271	cellular nitrogen compound biosynthetic process	IEP	HCCA
CC	GO:0140513	nuclear protein-containing complex	IEP	HCCA
CC	GO:0140535	intracellular protein-containing complex	IEP	HCCA
CC	GO:1902493	acetyltransferase complex	IEP	HCCA
CC	GO:1902562	H4 histone acetyltransferase complex	IEP	HCCA
CC	GO:1990234	transferase complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003173	PC4_C	39	88

External Links

No external refs found!