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  5. LOC_Os02g35300.1

LOC_Os02g35300.1 (LOC_Os02g35300)


Aliases : LOC_Os02g35300

Description : protein kinase (CDK9)


Gene families : OG0000343 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000343_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g35300.1
Cluster HCCA: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00099p00026630 evm_27.TU.AmTr_v1... Protein modification.phosphorylation.CMGC kinase... 0.05 OrthoFinder output from all 47 species
AT1G03740 No alias Protein kinase superfamily protein 0.03 OrthoFinder output from all 47 species
AT1G09600 No alias Protein kinase superfamily protein 0.04 OrthoFinder output from all 47 species
AT3G01085 No alias Protein kinase superfamily protein 0.08 OrthoFinder output from all 47 species
AT4G10010 No alias Protein kinase superfamily protein 0.09 OrthoFinder output from all 47 species
AT5G39420 cdc2cAt CDC2C 0.06 OrthoFinder output from all 47 species
Als_g06463 No alias EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Als_g49575 No alias EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Cba_g14082 No alias EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Ceric.03G017600.1 Ceric.03G017600 EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Ceric.27G063100.1 Ceric.27G063100 EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Ceric.37G054700.1 Ceric.37G054700 EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Dac_g02350 No alias EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Dac_g16207 No alias EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Dac_g23806 No alias EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Ehy_g25154 No alias EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
GSVIVT01007956001 IBS1 Protein modification.phosphorylation.CMGC kinase... 0.01 OrthoFinder output from all 47 species
GSVIVT01011471001 IBS1 Protein modification.phosphorylation.CMGC kinase... 0.09 OrthoFinder output from all 47 species
GSVIVT01036431001 No alias Protein modification.phosphorylation.CMGC kinase... 0.02 OrthoFinder output from all 47 species
Lfl_g03444 No alias EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Lfl_g04049 No alias EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
MA_10428062g0010 No alias Probable serine/threonine-protein kinase At1g54610... 0.03 OrthoFinder output from all 47 species
MA_10436318g0010 No alias protein kinase (CDK9) 0.02 OrthoFinder output from all 47 species
MA_9043g0040 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g03126 No alias EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Sam_g12387 No alias EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Sam_g19750 No alias EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Solyc02g088330.2.1 IBS1, Solyc02g088330 protein kinase (CDK9) 0.08 OrthoFinder output from all 47 species
Solyc06g064660.4.1 Solyc06g064660 protein kinase (CDK9) 0.06 OrthoFinder output from all 47 species
Spa_g46557 No alias EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Spa_g52648 No alias EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Tin_g05641 No alias EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Zm00001e010695_P004 IBS1, Zm00001e010695 protein kinase (CDK9) 0.01 OrthoFinder output from all 47 species
Zm00001e014840_P002 Zm00001e014840 protein kinase (CDK9) 0.1 OrthoFinder output from all 47 species
Zm00001e016519_P001 Zm00001e016519 protein kinase (CDK9) 0.04 OrthoFinder output from all 47 species
Zm00001e026001_P001 Zm00001e026001 protein kinase (CDK9) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006468 protein phosphorylation IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016161 beta-amylase activity IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
InterPro domains Description Start Stop
IPR000719 Prot_kinase_dom 158 443
No external refs found!