LOC_Os02g35690.1 (LOC_Os02g35690)


Aliases : LOC_Os02g35690

Description : transcription factor (Trihelix)


Gene families : OG0000970 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000970_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g35690.1

Target Alias Description ECC score Gene Family Method Actions
AT3G24490 No alias Alcohol dehydrogenase transcription factor Myb/SANT-like... 0.03 OrthoFinder output from all 47 species
AT3G58630 No alias sequence-specific DNA binding transcription factors 0.02 OrthoFinder output from all 47 species
Aev_g12188 No alias Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g18013 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Gb_18984 No alias transcription factor (Trihelix) 0.02 OrthoFinder output from all 47 species
LOC_Os05g48690.1 LOC_Os05g48690 transcription factor (Trihelix) 0.04 OrthoFinder output from all 47 species
MA_6829664g0010 No alias transcription factor (Trihelix) 0.02 OrthoFinder output from all 47 species
Smo440669 No alias RNA biosynthesis.transcriptional activation.Trihelix... 0.03 OrthoFinder output from all 47 species
Solyc02g076810.4.1 Solyc02g076810 transcription factor (Trihelix) 0.03 OrthoFinder output from all 47 species
Solyc12g010890.2.1 Solyc12g010890 transcription factor (Trihelix) 0.02 OrthoFinder output from all 47 species
Zm00001e007998_P001 Zm00001e007998 transcription factor (Trihelix) 0.04 OrthoFinder output from all 47 species
Zm00001e032412_P001 Zm00001e032412 transcription factor (Trihelix) 0.08 OrthoFinder output from all 47 species
Zm00001e040951_P001 Zm00001e040951 transcription factor (Trihelix) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!