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  5. LOC_Os02g35970.1

LOC_Os02g35970.1 (RPT3, NPH3, JK218,...)


Aliases : RPT3, NPH3, JK218, LOC_Os02g35970

Description : component NPH3 of CUL3-BTB E3 ubiquitin ligase complex


Gene families : OG0000449 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000449_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g35970.1
Cluster HCCA: Cluster_140

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00038p00155420 RPT3, NPH3,... Root phototropism protein 3 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
AT1G67900 No alias Phototropic-responsive NPH3 family protein 0.05 OrthoFinder output from all 47 species
AT2G14820 NPY2 Phototropic-responsive NPH3 family protein 0.06 OrthoFinder output from all 47 species
AT4G31820 MAB4, NPY1, ENP Phototropic-responsive NPH3 family protein 0.05 OrthoFinder output from all 47 species
AT5G10250 DOT3 Phototropic-responsive NPH3 family protein 0.02 OrthoFinder output from all 47 species
AT5G64330 RPT3, NPH3, JK218 Phototropic-responsive NPH3 family protein 0.07 OrthoFinder output from all 47 species
Adi_g007915 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g18908 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Ala_g21688 RPT3, NPH3, JK218 substrate adaptor *(NPH3) of CUL3-BTB E3 ubiquitin... 0.03 OrthoFinder output from all 47 species
Ala_g32547 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Als_g15911 RPT3, NPH3, JK218 substrate adaptor *(NPH3) of CUL3-BTB E3 ubiquitin... 0.03 OrthoFinder output from all 47 species
Aop_g07082 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Aspi01Gene00447.t1 Aspi01Gene00447 substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Aspi01Gene08949.t1 Aspi01Gene08949 substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Aspi01Gene09339.t1 RPT3, NPH3,... substrate adaptor *(NPH3) of CUL3-BTB E3 ubiquitin... 0.03 OrthoFinder output from all 47 species
Aspi01Gene23539.t1 Aspi01Gene23539 substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Aspi01Gene41127.t1 Aspi01Gene41127 substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Aspi01Gene58781.t1 Aspi01Gene58781 substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Azfi_s0033.g025021 No alias substrate adaptor *(NRL) of CUL3-based E3 ubiquitin... 0.03 OrthoFinder output from all 47 species
Azfi_s0076.g037787 No alias not classified & original description: CDS=431-2302 0.04 OrthoFinder output from all 47 species
Azfi_s0116.g046412 No alias not classified & original description: CDS=1316-3601 0.04 OrthoFinder output from all 47 species
Cba_g15372 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Cba_g22575 RPT3, NPH3, JK218 substrate adaptor *(NPH3) of CUL3-BTB E3 ubiquitin... 0.02 OrthoFinder output from all 47 species
Ceric.11G059700.1 Ceric.11G059700 substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Ceric.32G010700.1 Ceric.32G010700 not classified & original description: pacid=50597870... 0.03 OrthoFinder output from all 47 species
Ceric.34G006100.1 Ceric.34G006100 substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Dac_g32917 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Dde_g08618 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Dde_g31714 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
GSVIVT01000534001 No alias BTB/POZ domain-containing protein At1g67900... 0.03 OrthoFinder output from all 47 species
GSVIVT01002274001 DOT3 BTB/POZ domain-containing protein DOT3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01016261001 No alias BTB/POZ domain-containing protein At5g03250... 0.02 OrthoFinder output from all 47 species
GSVIVT01035968001 MAB4, NPY1, ENP BTB/POZ domain-containing protein NPY1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01037852001 NPY2 BTB/POZ domain-containing protein NPY2 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Gb_34273 RPT3, NPH3, JK218 component NPH3 of CUL3-BTB E3 ubiquitin ligase complex 0.02 OrthoFinder output from all 47 species
LOC_Os09g09370.2 LOC_Os09g09370 BTB/POZ domain-containing protein At5g47800... 0.04 OrthoFinder output from all 47 species
Len_g01351 RPT3, NPH3, JK218 substrate adaptor *(NPH3) of CUL3-BTB E3 ubiquitin... 0.03 OrthoFinder output from all 47 species
MA_135496g0010 RPT3, NPH3, JK218 Root phototropism protein 3 OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
MA_52004g0010 RPT3, NPH3, JK218 component NPH3 of CUL3-BTB E3 ubiquitin ligase complex 0.06 OrthoFinder output from all 47 species
Msp_g13181 RPT3, NPH3, JK218 substrate adaptor *(NPH3) of CUL3-BTB E3 ubiquitin... 0.02 OrthoFinder output from all 47 species
Msp_g24094 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Nbi_g04882 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Nbi_g08775 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Pir_g09759 RPT3, NPH3, JK218 substrate adaptor *(NPH3) of CUL3-BTB E3 ubiquitin... 0.02 OrthoFinder output from all 47 species
Ppi_g03158 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Ppi_g49328 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001683 No alias not classified & original description: CDS=1-1248 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0070.g016653 RPT3, NPH3, JK218 substrate adaptor *(NPH3) of CUL3-BTB E3 ubiquitin... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0145.g023009 No alias not classified & original description: CDS=496-1932 0.03 OrthoFinder output from all 47 species
Sam_g25277 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g39393 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g40025 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc05g013570.3.1 Solyc05g013570 BTB/POZ domain-containing protein At1g67900... 0.06 OrthoFinder output from all 47 species
Solyc10g047530.2.1 RPT3, NPH3,... component NPH3 of CUL3-BTB E3 ubiquitin ligase complex 0.03 OrthoFinder output from all 47 species
Solyc10g049660.2.1 NPY2, Solyc10g049660 BTB/POZ domain-containing protein NPY2 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Spa_g22065 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Spa_g37457 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Spa_g39095 MAB4, NPY1, ENP not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e003063_P004 NPY2, Zm00001e003063 BTB/POZ domain-containing protein NPY2 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e008748_P001 RPT3, NPH3,... Coleoptile phototropism protein 1 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
Zm00001e014883_P001 RPT3, NPH3,... component NPH3 of CUL3-BTB E3 ubiquitin ligase complex 0.04 OrthoFinder output from all 47 species
Zm00001e014998_P003 Zm00001e014998 BTB/POZ domain-containing protein At1g67900... 0.03 OrthoFinder output from all 47 species
Zm00001e033674_P003 Zm00001e033674 BTB/POZ domain-containing protein At5g47800... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0004866 endopeptidase inhibitor activity IEP HCCA
MF GO:0004869 cysteine-type endopeptidase inhibitor activity IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016843 amine-lyase activity IEP HCCA
MF GO:0016844 strictosidine synthase activity IEP HCCA
MF GO:0030414 peptidase inhibitor activity IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
MF GO:0061134 peptidase regulator activity IEP HCCA
MF GO:0061135 endopeptidase regulator activity IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
InterPro domains Description Start Stop
IPR027356 NPH3_dom 268 583
No external refs found!