LOC_Os02g38820.1 (LOC_Os02g38820)


Aliases : LOC_Os02g38820

Description : HHL1 protein involved in PS-II assembly


Gene families : OG0006939 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006939_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g38820.1
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
AT1G67700 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.08 OrthoFinder output from all 47 species
Adi_g033649 No alias protein involved in PS-II assembly *(HHL1) & original... 0.03 OrthoFinder output from all 47 species
Aev_g03714 No alias protein involved in PS-II assembly *(HHL1) & original... 0.03 OrthoFinder output from all 47 species
Ala_g07520 No alias protein involved in PS-II assembly *(HHL1) & original... 0.03 OrthoFinder output from all 47 species
Als_g00467 No alias protein involved in PS-II assembly *(HHL1) & original... 0.04 OrthoFinder output from all 47 species
Aob_g06998 No alias protein involved in PS-II assembly *(HHL1) & original... 0.04 OrthoFinder output from all 47 species
Aop_g06739 No alias protein involved in PS-II assembly *(HHL1) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene07366.t1 Aspi01Gene07366 protein involved in PS-II assembly *(HHL1) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0531.g075832 No alias protein involved in PS-II assembly *(HHL1) & original... 0.05 OrthoFinder output from all 47 species
Cba_g10860 No alias protein involved in PS-II assembly *(HHL1) & original... 0.06 OrthoFinder output from all 47 species
Cba_g10861 No alias protein involved in PS-II assembly *(HHL1) & original... 0.05 OrthoFinder output from all 47 species
Cre03.g146167 No alias Photosynthesis.photophosphorylation.photosystem... 0.05 OrthoFinder output from all 47 species
Dac_g16635 No alias protein involved in PS-II assembly *(HHL1) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g31028 No alias protein involved in PS-II assembly *(HHL1) & original... 0.03 OrthoFinder output from all 47 species
Dde_g43832 No alias protein involved in PS-II assembly *(HHL1) & original... 0.04 OrthoFinder output from all 47 species
Ehy_g04373 No alias protein involved in PS-II assembly *(HHL1) & original... 0.04 OrthoFinder output from all 47 species
GSVIVT01010306001 No alias Photosynthesis.photophosphorylation.photosystem... 0.03 OrthoFinder output from all 47 species
Gb_36498 No alias HHL1 protein involved in PS-II assembly 0.04 OrthoFinder output from all 47 species
Len_g53688 No alias protein involved in PS-II assembly *(HHL1) & original... 0.04 OrthoFinder output from all 47 species
Lfl_g05888 No alias protein involved in PS-II assembly *(HHL1) & original... 0.04 OrthoFinder output from all 47 species
Mp4g20930.1 No alias HHL1 protein involved in PS-II assembly 0.06 OrthoFinder output from all 47 species
Msp_g02701 No alias protein involved in PS-II assembly *(HHL1) & original... 0.03 OrthoFinder output from all 47 species
Nbi_g12181 No alias protein involved in PS-II assembly *(HHL1) & original... 0.05 OrthoFinder output from all 47 species
Ore_g28473 No alias protein involved in PS-II assembly *(HHL1) & original... 0.03 OrthoFinder output from all 47 species
Ore_g32779 No alias protein involved in PS-II assembly *(HHL1) & original... 0.04 OrthoFinder output from all 47 species
Pir_g13350 No alias protein involved in PS-II assembly *(HHL1) & original... 0.02 OrthoFinder output from all 47 species
Pnu_g10877 No alias protein involved in PS-II assembly *(HHL1) & original... 0.05 OrthoFinder output from all 47 species
Pp3c14_9580V3.1 Pp3c14_9580 No annotation 0.02 OrthoFinder output from all 47 species
Ppi_g54816 No alias protein involved in PS-II assembly *(HHL1) & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006133 No alias protein involved in PS-II assembly *(HHL1) & original... 0.02 OrthoFinder output from all 47 species
Sam_g09632 No alias protein involved in PS-II assembly *(HHL1) & original... 0.04 OrthoFinder output from all 47 species
Solyc05g014310.3.1 Solyc05g014310 HHL1 protein involved in PS-II assembly 0.06 OrthoFinder output from all 47 species
Spa_g52699 No alias protein involved in PS-II assembly *(HHL1) & original... 0.02 OrthoFinder output from all 47 species
Zm00001e015029_P001 Zm00001e015029 HHL1 protein involved in PS-II assembly 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP HCCA
BP GO:0017038 protein import IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
MF GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0098809 nitrite reductase activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!