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  5. LOC_Os02g39330.1

LOC_Os02g39330.1 (ATEP3, EP3, CHIV,...)


Aliases : ATEP3, EP3, CHIV, ATCHITIV, LOC_Os02g39330

Description : Chitinase 6 OS=Oryza sativa subsp. japonica (sp|q6k8r2|chi6_orysj : 471.0)


Gene families : OG0000280 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000280_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g39330.1
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00243300 HCHIB, B-CHI,... Endochitinase A2 OS=Pisum sativum 0.04 OrthoFinder output from all 47 species
AMTR_s00001p00243570 HCHIB, B-CHI,... Basic 30 kDa endochitinase OS=Solanum lycopersicum 0.03 OrthoFinder output from all 47 species
AMTR_s00001p00243680 HCHIB, B-CHI,... Chitinase 3 OS=Oryza sativa subsp. japonica 0.04 OrthoFinder output from all 47 species
AMTR_s00001p00244170 HCHIB, B-CHI,... Chitinase 3 OS=Oryza sativa subsp. japonica 0.05 OrthoFinder output from all 47 species
AMTR_s00066p00199730 ATEP3, EP3,... Endochitinase EP3 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AT1G02360 No alias Chitinase family protein 0.05 OrthoFinder output from all 47 species
AT2G43570 CHI chitinase, putative 0.04 OrthoFinder output from all 47 species
AT2G43580 No alias Chitinase family protein 0.06 OrthoFinder output from all 47 species
AT2G43590 No alias Chitinase family protein 0.04 OrthoFinder output from all 47 species
AT2G43610 No alias Chitinase family protein 0.04 OrthoFinder output from all 47 species
AT2G43620 No alias Chitinase family protein 0.07 OrthoFinder output from all 47 species
AT3G47540 No alias Chitinase family protein 0.03 OrthoFinder output from all 47 species
AT3G54420 ATEP3, EP3,... homolog of carrot EP3-3 chitinase 0.06 OrthoFinder output from all 47 species
AT4G01700 No alias Chitinase family protein 0.04 OrthoFinder output from all 47 species
Adi_g017574 ATEP3, EP3,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g040394 HCHIB, B-CHI,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g02874 HCHIB, B-CHI,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g04564 HCHIB, B-CHI,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g06392 HCHIB, B-CHI,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g38851 HCHIB, B-CHI,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g25708 ATEP3, EP3,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g36519 HCHIB, B-CHI,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g40428 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g18707 ATEP3, EP3,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g35678 ATEP3, EP3,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene23821.t1 ATEP3, EP3,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene32076.t1 ATEP3, EP3,... not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene32079.t1 ATEP3, EP3,... not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene32082.t1 ATEP3, EP3,... not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene32083.t1 ATEP3, EP3,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene32084.t1 ATEP3, EP3,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene32113.t1 ATEP3, EP3,... not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene32150.t1 HCHIB, B-CHI,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000741 ATEP3, EP3,... not classified & original description: CDS=226-924 0.05 OrthoFinder output from all 47 species
Azfi_s0001.g000743 ATEP3, EP3,... not classified & original description: CDS=226-921 0.03 OrthoFinder output from all 47 species
Dcu_g19889 ATEP3, EP3,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g18506 ATEP3, EP3,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g23248 HCHIB, B-CHI,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01007191001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01028243001 No alias Chitinase 10 OS=Oryza sativa subsp. japonica 0.06 OrthoFinder output from all 47 species
GSVIVT01038108001 ATEP3, EP3,... Endochitinase EP3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01038111001 ATEP3, EP3,... Endochitinase EP3 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
GSVIVT01038116001 ATEP3, EP3,... Endochitinase EP3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01038120001 ATEP3, EP3,... Endochitinase EP3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01038126001 ATEP3, EP3,... Endochitinase EP3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_03375 No alias Chitinase 10 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
Gb_07463 No alias Chitinase 4 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Gb_07464 No alias Chitinase 4 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Gb_20764 No alias Chitinase 5 OS=Oryza sativa subsp. japonica... 0.05 OrthoFinder output from all 47 species
Gb_20766 No alias Chitinase 5 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Gb_20767 No alias Chitinase 5 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
Gb_29992 No alias Chitinase 5 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
Gb_29993 No alias Chitinase 5 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
LOC_Os01g18400.1 LOC_Os01g18400 Chitinase 10 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
LOC_Os04g41620.1 ATEP3, EP3,... Chitinase 4 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
LOC_Os04g41640.1 LOC_Os04g41640 Chitinase 4 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
LOC_Os05g04690.1 LOC_Os05g04690 Chitinase 10 OS=Oryza sativa subsp. japonica... 0.06 OrthoFinder output from all 47 species
LOC_Os06g51050.1 HCHIB, B-CHI,... Chitinase 3 OS=Oryza sativa subsp. japonica... 0.07 OrthoFinder output from all 47 species
LOC_Os06g51060.1 HCHIB, B-CHI,... Chitinase 1 OS=Oryza sativa subsp. japonica... 0.07 OrthoFinder output from all 47 species
LOC_Os10g39680.1 HCHIB, B-CHI,... Chitinase 8 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
Len_g47568 HCHIB, B-CHI,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g09360 HCHIB, B-CHI,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g25481 ATEP3, EP3,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_102538g0010 No alias Endochitinase A OS=Zea mays (sp|p29022|chia_maize : 100.0) 0.04 OrthoFinder output from all 47 species
MA_10313114g0010 HCHIB, B-CHI,... Endochitinase B OS=Nicotiana tabacum... 0.02 OrthoFinder output from all 47 species
MA_10427514g0010 No alias Chitinase 4 OS=Oryza sativa subsp. japonica... 0.05 OrthoFinder output from all 47 species
MA_10430424g0010 ATEP3, EP3,... Chitinase 5 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
MA_10435326g0010 ATEP3, EP3,... Endochitinase EP3 OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
MA_10435326g0020 ATEP3, EP3,... no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_1327504g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_18470g0010 HCHIB, B-CHI,... Basic endochitinase C OS=Secale cereale... 0.02 OrthoFinder output from all 47 species
MA_18470g0020 HCHIB, B-CHI,... Endochitinase A2 OS=Pisum sativum (sp|p21226|chi2_pea : 201.0) 0.05 OrthoFinder output from all 47 species
MA_191308g0010 ATEP3, EP3,... Chitinase 5 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
MA_295712g0010 ATEP3, EP3,... Chitinase 5 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
MA_36141g0010 ATEP3, EP3,... Chitinase 5 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
MA_44734g0010 ATEP3, EP3,... Chitinase 4 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
MA_448160g0010 ATEP3, EP3,... Chitinase 5 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
MA_4970836g0010 HCHIB, B-CHI,... no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_5029466g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_530083g0010 HCHIB, B-CHI,... no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_741127g0010 No alias Endochitinase At2g43610 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_80085g0010 HCHIB, B-CHI,... Basic endochitinase C OS=Secale cereale... 0.03 OrthoFinder output from all 47 species
MA_8921185g0010 HCHIB, B-CHI,... Basic endochitinase C OS=Secale cereale... 0.06 OrthoFinder output from all 47 species
MA_8960362g0010 HCHIB, B-CHI,... Endochitinase 1 OS=Theobroma cacao (sp|q41596|chi1_thecc : 81.6) 0.05 OrthoFinder output from all 47 species
MA_9682123g0010 ATEP3, EP3,... Chitinase 4 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Mp2g21810.1 HCHIB, B-CHI,... Chitinase 1 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Mp2g24440.1 HCHIB, B-CHI,... Endochitinase CH25 OS=Brassica napus... 0.03 OrthoFinder output from all 47 species
Mp4g20440.1 HCHIB, B-CHI,... Endochitinase 1 OS=Theobroma cacao (sp|q41596|chi1_thecc : 235.0) 0.03 OrthoFinder output from all 47 species
Mp4g20450.1 HCHIB, B-CHI,... Endochitinase 1 OS=Theobroma cacao (sp|q41596|chi1_thecc : 229.0) 0.03 OrthoFinder output from all 47 species
Mp4g20470.1 HCHIB, B-CHI,... Basic endochitinase B OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Nbi_g23741 ATEP3, EP3,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g34620 ATEP3, EP3,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g30042 ATEP3, EP3,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g32598 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g32060 ATEP3, EP3,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g01615 HCHIB, B-CHI,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g32706 HCHIB, B-CHI,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06049 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g32610 HCHIB, B-CHI,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g57704 HCHIB, B-CHI,... not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g60891 HCHIB, B-CHI,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo138198 CHI No description available 0.02 OrthoFinder output from all 47 species
Smo14768 HCHIB, B-CHI,... Chitinase 2 OS=Oryza sativa subsp. japonica 0.02 OrthoFinder output from all 47 species
Smo426710 No alias Endochitinase A OS=Zea mays 0.04 OrthoFinder output from all 47 species
Smo443112 HCHIB, B-CHI,... Basic endochitinase B OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Smo446851 HCHIB, B-CHI,... Endochitinase A2 OS=Pisum sativum 0.02 OrthoFinder output from all 47 species
Solyc02g061770.4.1 HCHIB, B-CHI,... Basic endochitinase (Fragment) OS=Solanum lycopersicum... 0.04 OrthoFinder output from all 47 species
Solyc02g082920.4.1 HCHIB, B-CHI,... Acidic 26 kDa endochitinase OS=Solanum lycopersicum... 0.03 OrthoFinder output from all 47 species
Solyc02g082930.3.1 HCHIB, B-CHI,... Acidic 27 kDa endochitinase OS=Solanum lycopersicum... 0.04 OrthoFinder output from all 47 species
Solyc02g082960.3.1 HCHIB, B-CHI,... Basic endochitinase (Fragment) OS=Solanum lycopersicum... 0.04 OrthoFinder output from all 47 species
Solyc03g116240.3.1 HEL, PR4, PR-4,... no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc04g072000.4.1 ATEP3, EP3,... Endochitinase EP3 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc06g053380.3.1 ATEP3, EP3,... Chitinase 5 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
Solyc07g009530.1.1 HCHIB, B-CHI,... no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc10g055800.2.1 HCHIB, B-CHI,... Basic 30 kDa endochitinase OS=Solanum lycopersicum... 0.04 OrthoFinder output from all 47 species
Solyc10g055810.2.1 HCHIB, B-CHI,... Basic 30 kDa endochitinase OS=Solanum lycopersicum... 0.04 OrthoFinder output from all 47 species
Tin_g32703 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e000271_P001 HCHIB, B-CHI,... Chitinase 11 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Zm00001e002252_P001 HCHIB, B-CHI,... Chitinase 8 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Zm00001e007715_P001 ATEP3, EP3,... Endochitinase A OS=Zea mays (sp|p29022|chia_maize : 330.0) 0.03 OrthoFinder output from all 47 species
Zm00001e007716_P001 Zm00001e007716 Endochitinase A OS=Zea mays (sp|p29022|chia_maize : 455.0) 0.03 OrthoFinder output from all 47 species
Zm00001e027534_P001 Zm00001e027534 Chitinase 10 OS=Oryza sativa subsp. japonica... 0.06 OrthoFinder output from all 47 species
Zm00001e030152_P001 HCHIB, B-CHI,... Basic endochitinase A OS=Secale cereale... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004568 chitinase activity IEA Interproscan
BP GO:0006032 chitin catabolic process IEA Interproscan
MF GO:0008061 chitin binding IEA Interproscan
BP GO:0016998 cell wall macromolecule catabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0004866 endopeptidase inhibitor activity IEP HCCA
MF GO:0004867 serine-type endopeptidase inhibitor activity IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030414 peptidase inhibitor activity IEP HCCA
MF GO:0061134 peptidase regulator activity IEP HCCA
MF GO:0061135 endopeptidase regulator activity IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
InterPro domains Description Start Stop
IPR000726 Glyco_hydro_19_cat 224 271
IPR000726 Glyco_hydro_19_cat 72 215
IPR001002 Chitin-bd_1 27 58
No external refs found!