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  5. LOC_Os02g39960.1

LOC_Os02g39960.1 (LOC_Os02g39960)


Aliases : LOC_Os02g39960

Description : xylogalacturonan xylosyltransferase


Gene families : OG0000367 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000367_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g39960.1

Target Alias Description ECC score Gene Family Method Actions
Aev_g14609 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g11313 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g15982 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene28831.t1 Aspi01Gene28831 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene28837.t1 Aspi01Gene28837 not classified & original description: none 0.06 OrthoFinder output from all 47 species
GSVIVT01012805001 No alias Probable glycosyltransferase At5g20260 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
GSVIVT01012807001 No alias Cell... 0.01 OrthoFinder output from all 47 species
Gb_34769 No alias Probable glycosyltransferase At5g03795 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Len_g10845 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_217947g0010 No alias Probable glycosyltransferase At5g03795 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Ore_g07718 No alias xylogalacturonan xylosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g30444 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g63757 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Solyc08g066690.4.1 Solyc08g066690 Probable glycosyltransferase At5g03795 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
Solyc12g062940.3.1 Solyc12g062940 Probable glycosyltransferase At5g03795 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR040911 Exostosin_GT47 139 432
No external refs found!