1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os02g40730.1

LOC_Os02g40730.1 (ATAMT1, AMT1;1,...)


Aliases : ATAMT1, AMT1;1, ATAMT1;1, LOC_Os02g40730

Description : ammonium transporter (AMT1)


Gene families : OG0001233 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001233_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g40730.1
Cluster HCCA: Cluster_148

Target Alias Description ECC score Gene Family Method Actions
AT3G24290 AMT1;5 ammonium transporter 1;5 0.07 OrthoFinder output from all 47 species
AT3G24300 AMT1;3, ATAMT1;3 ammonium transporter 1;3 0.05 OrthoFinder output from all 47 species
AT4G13510 ATAMT1, AMT1;1, ATAMT1;1 ammonium transporter 1;1 0.03 OrthoFinder output from all 47 species
Ceric.27G043300.1 AMT1;2,... ammonium transporter *(AMT1) & original description:... 0.02 OrthoFinder output from all 47 species
Dac_g11087 AMT1;2, ATAMT1;2 ammonium transporter *(AMT1) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g02918 AMT1;2, ATAMT1;2 ammonium transporter *(AMT1) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01001853001 ATAMT1, AMT1;1, ATAMT1;1 Ammonium transporter 1 member 1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Gb_41196 No alias ammonium transporter (AMT1) 0.03 OrthoFinder output from all 47 species
MA_369429g0010 AMT1;2, ATAMT1;2 ammonium transporter (AMT1) 0.02 OrthoFinder output from all 47 species
MA_71816g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp8g00360.1 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Mp8g05280.1 AMT1;2, ATAMT1;2 ammonium transporter (AMT1) 0.02 OrthoFinder output from all 47 species
Mp8g05310.1 AMT1;3, ATAMT1;3 ammonium transporter (AMT1) 0.03 OrthoFinder output from all 47 species
Pnu_g10317 AMT1;2, ATAMT1;2 ammonium transporter *(AMT1) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05867 AMT1;2, ATAMT1;2 ammonium transporter *(AMT1) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g18688 AMT1;2, ATAMT1;2 ammonium transporter *(AMT1) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0018.g007623 ATAMT1, AMT1;1, ATAMT1;1 ammonium transporter *(AMT1) & original description: CDS=1-1485 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0087.g018510 AMT1;3, ATAMT1;3 ammonium transporter *(AMT1) & original description: CDS=1-1419 0.03 OrthoFinder output from all 47 species
Smo163770 AMT1;3, ATAMT1;3 Solute transport.channels.AMT family.ammonium... 0.04 OrthoFinder output from all 47 species
Solyc04g050440.3.1 AMT1;2,... ammonium transporter (AMT1) 0.03 OrthoFinder output from all 47 species
Zm00001e041215_P001 ATAMT1, AMT1;1,... ammonium transporter (AMT1) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008519 ammonium transmembrane transporter activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0008146 sulfotransferase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
MF GO:0045735 nutrient reservoir activity IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR024041 NH4_transpt_AmtB-like_dom 38 460
No external refs found!