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  5. LOC_Os02g42250.1

LOC_Os02g42250.1 (LOC_Os02g42250)


Aliases : LOC_Os02g42250

Description : Putative protein phosphatase 2C 23 OS=Oryza sativa subsp. japonica (sp|q6h7j4|p2c23_orysj : 569.0)


Gene families : OG0000571 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000571_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g42250.1

Target Alias Description ECC score Gene Family Method Actions
Ala_g06536 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0212.g058178 No alias not classified & original description: CDS=137-1573 0.02 OrthoFinder output from all 47 species
Solyc07g064390.1.1 Solyc07g064390 Probable protein phosphatase 2C 55 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Spa_g06001 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEP HCCA
MF GO:0008146 sulfotransferase activity IEP HCCA
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
InterPro domains Description Start Stop
IPR001932 PPM-type_phosphatase-like_dom 108 313
No external refs found!