1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os02g43030.1

LOC_Os02g43030.1 (LOC_Os02g43030)


Aliases : LOC_Os02g43030

Description : iron cation transporter (VTL)


Gene families : OG0003909 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003909_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g43030.1
Cluster HCCA: Cluster_115

Target Alias Description ECC score Gene Family Method Actions
Aob_g19880 No alias iron cation transporter *(VTL) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.26G043900.1 Ceric.26G043900 iron cation transporter *(VTL) & original description:... 0.02 OrthoFinder output from all 47 species
Dde_g47894 No alias iron cation transporter *(VTL) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01029754001 No alias Solute transport.carrier-mediated transport.VIT... 0.05 OrthoFinder output from all 47 species
GSVIVT01029755001 No alias Solute transport.carrier-mediated transport.VIT... 0.04 OrthoFinder output from all 47 species
Gb_38559 No alias iron cation transporter (VTL) 0.02 OrthoFinder output from all 47 species
Len_g49458 No alias iron cation transporter *(VTL) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g104780.3.1 Solyc01g104780 iron cation transporter (VTL) 0.04 OrthoFinder output from all 47 species
Solyc01g104810.2.1 Solyc01g104810 iron cation transporter (VTL) 0.03 OrthoFinder output from all 47 species
Solyc01g104820.4.1 Solyc01g104820 iron cation transporter (VTL) 0.03 OrthoFinder output from all 47 species
Spa_g41979 No alias iron cation transporter *(VTL) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e015257_P001 Zm00001e015257 iron cation transporter (VTL) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005384 manganese ion transmembrane transporter activity IEA Interproscan
BP GO:0030026 cellular manganese ion homeostasis IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP HCCA
MF GO:0004427 inorganic diphosphate phosphatase activity IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR008217 Ccc1_fam 137 223
IPR008217 Ccc1_fam 58 135
No external refs found!