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  5. LOC_Os02g44470.1

LOC_Os02g44470.1 (ADF11, LOC_Os02g44470)


Aliases : ADF11, LOC_Os02g44470

Description : actin-depolymerizing factor


Gene families : OG0000202 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000202_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g44470.1
Cluster HCCA: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00126220 ADF8,... Cytoskeleton.microfilament network.actin... 0.08 OrthoFinder output from all 47 species
AMTR_s00140p00036970 ADF8,... Cytoskeleton.microfilament network.actin... 0.04 OrthoFinder output from all 47 species
AT1G01750 ADF11 actin depolymerizing factor 11 0.07 OrthoFinder output from all 47 species
AT4G00680 ADF8 actin depolymerizing factor 8 0.06 OrthoFinder output from all 47 species
AT4G25590 ADF7 actin depolymerizing factor 7 0.04 OrthoFinder output from all 47 species
AT5G52360 ADF10 actin depolymerizing factor 10 0.06 OrthoFinder output from all 47 species
Ala_g10466 ADF11 actin-depolymerizing factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g44468 ADF8 actin-depolymerizing factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g00842 ADF8 actin-depolymerizing factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g00265 ADF8 actin-depolymerizing factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0005.g009152 ADF7 actin-depolymerizing factor & original description: CDS=19-414 0.05 OrthoFinder output from all 47 species
Azfi_s0050.g031042 ADF11 actin-depolymerizing factor & original description: CDS=167-583 0.04 OrthoFinder output from all 47 species
Dac_g34893 ADF6, ATADF6 actin-depolymerizing factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01016593001 ATADF1, ADF1, atadf Cytoskeleton.microfilament network.actin... 0.03 OrthoFinder output from all 47 species
GSVIVT01026879001 ADF11 Cytoskeleton.microfilament network.actin... 0.08 OrthoFinder output from all 47 species
GSVIVT01027807001 ADF6, ATADF6 Cytoskeleton.microfilament network.actin... 0.03 OrthoFinder output from all 47 species
GSVIVT01028324001 ADF6, ATADF6 Cytoskeleton.microfilament network.actin... 0.03 OrthoFinder output from all 47 species
GSVIVT01028963001 ADF7 Cytoskeleton.microfilament network.actin... 0.11 OrthoFinder output from all 47 species
Gb_02796 ADF6, ATADF6 actin-depolymerizing factor 0.02 OrthoFinder output from all 47 species
Len_g28669 ADF8 actin-depolymerizing factor & original description: none 0.03 OrthoFinder output from all 47 species
Mp3g20570.1 ADF11 actin-depolymerizing factor 0.02 OrthoFinder output from all 47 species
Ore_g42221 ADF7 actin-depolymerizing factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g42530 ADF8 actin-depolymerizing factor & original description: none 0.01 OrthoFinder output from all 47 species
Solyc01g094400.3.1 ADF10, Solyc01g094400 actin-depolymerizing factor 0.03 OrthoFinder output from all 47 species
Solyc01g111380.3.1 ADF5, ATADF5,... actin-depolymerizing factor 0.02 OrthoFinder output from all 47 species
Solyc10g017550.4.1 ADF11, Solyc10g017550 actin-depolymerizing factor 0.07 OrthoFinder output from all 47 species
Zm00001e007293_P001 ADF11, Zm00001e007293 actin-depolymerizing factor 0.11 OrthoFinder output from all 47 species
Zm00001e023183_P001 ADF7, Zm00001e023183 actin-depolymerizing factor 0.15 OrthoFinder output from all 47 species
Zm00001e034985_P001 ADF11, Zm00001e034985 actin-depolymerizing factor 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
MF GO:0004427 inorganic diphosphate phosphatase activity IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
MF GO:0008081 phosphoric diester hydrolase activity IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016843 amine-lyase activity IEP HCCA
MF GO:0016844 strictosidine synthase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0046903 secretion IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:0140352 export from cell IEP HCCA
InterPro domains Description Start Stop
IPR002108 ADF-H 33 155
No external refs found!