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  5. LOC_Os02g46440.1

LOC_Os02g46440.1 (LOC_Os02g46440)


Aliases : LOC_Os02g46440

Description : no hits & (original description: none)


Gene families : OG0001115 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001115_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g46440.1

Target Alias Description ECC score Gene Family Method Actions
AT3G20230 No alias Ribosomal L18p/L5e family protein 0.09 OrthoFinder output from all 47 species
Adi_g084304 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g13855 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g02804 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0199.g057458 No alias not classified & original description: CDS=71-730 0.04 OrthoFinder output from all 47 species
Mp6g15290.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g02829 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g20130 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g55038 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0043.g012945 No alias not classified & original description: CDS=16-681 0.03 OrthoFinder output from all 47 species
Smo130450 No alias No description available 0.02 OrthoFinder output from all 47 species
Solyc01g088470.3.1 Solyc01g088470 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Zm00001e015482_P001 Zm00001e015482 no hits & (original description: none) 0.11 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
BP GO:0006450 regulation of translational fidelity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0065008 regulation of biological quality IEP HCCA
InterPro domains Description Start Stop
IPR005484 Ribosomal_L18 66 180
No external refs found!