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  5. LOC_Os02g46850.1

LOC_Os02g46850.1 (OPT4, ATOPT4, LOC_Os02g46850)


Aliases : OPT4, ATOPT4, LOC_Os02g46850

Description : oligopeptide transporter (OPT)


Gene families : OG0000539 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000539_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g46850.1

Target Alias Description ECC score Gene Family Method Actions
Ala_g08303 OPT4, ATOPT4 oligopeptide transporter *(OPT) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g03224 OPT4, ATOPT4 oligopeptide transporter *(OPT) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g06148 OPT7, ATOPT7 oligopeptide transporter *(OPT) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g09180 OPT4, ATOPT4 oligopeptide transporter *(OPT) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g16977 OPT4, ATOPT4 oligopeptide transporter *(OPT) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01009222001 ATOPT2, OPT2 Solute transport.carrier-mediated transport.OPT... 0.03 OrthoFinder output from all 47 species
MA_10185385g0010 OPT4, ATOPT4 oligopeptide transporter (OPT) 0.05 OrthoFinder output from all 47 species
MA_27970g0010 OPT3, ATOPT3 oligopeptide transporter (OPT) 0.02 OrthoFinder output from all 47 species
MA_541g0010 OPT3, ATOPT3 oligopeptide transporter (OPT) 0.02 OrthoFinder output from all 47 species
Mp4g06980.1 OPT7, ATOPT7 oligopeptide transporter (OPT) 0.02 OrthoFinder output from all 47 species
Ore_g30592 OPT4, ATOPT4 oligopeptide transporter *(OPT) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g32248 OPT4, ATOPT4 oligopeptide transporter *(OPT) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g16769 OPT4, ATOPT4 oligopeptide transporter *(OPT) & original description: none 0.04 OrthoFinder output from all 47 species
Solyc02g083740.2.1 OPT7, ATOPT7,... oligopeptide transporter (OPT) 0.02 OrthoFinder output from all 47 species
Solyc03g082700.4.1 OPT7, ATOPT7,... oligopeptide transporter (OPT) 0.02 OrthoFinder output from all 47 species
Zm00001e005697_P002 OPT3, ATOPT3,... oligopeptide transporter (OPT) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0019321 pentose metabolic process IEP HCCA
BP GO:0019566 arabinose metabolic process IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0031047 RNA-mediated gene silencing IEP HCCA
BP GO:0046373 L-arabinose metabolic process IEP HCCA
MF GO:0046556 alpha-L-arabinofuranosidase activity IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
InterPro domains Description Start Stop
IPR004813 OPT 14 519
No external refs found!