Aliases : LOC_Os02g49880
Description : transcription factor (BBX-CO)
Gene families : OG0001051 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001051_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00025p00156240 | CIA2,... | RNA biosynthesis.transcriptional activation.C2C2... | 0.1 | OrthoFinder output from all 47 species | |
| AMTR_s00073p00061640 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.C2C2... | 0.03 | OrthoFinder output from all 47 species | |
| AT1G68520 | No alias | B-box type zinc finger protein with CCT domain | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g009638 | No alias | CMF transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g01755 | No alias | CMF transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g09487 | No alias | BBX class-III transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g08686 | No alias | CMF transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g17463 | No alias | BBX class-III transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g01431 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g04399 | No alias | CMF transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g13738 | No alias | CMF transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Cba_g13442 | No alias | CMF transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g20220 | No alias | BBX class-III transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g26917 | No alias | BBX class-III transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.16G076600.1 | Ceric.16G076600 | not classified & original description: pacid=50589566... | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g23913 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g06850 | No alias | BBX class-III transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g07785 | No alias | CMF transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g08483 | No alias | CMF transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01010855001 | CIA2 | RNA biosynthesis.transcriptional activation.C2C2... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01011897001 | No alias | RNA biosynthesis.transcriptional activation.C2C2... | 0.09 | OrthoFinder output from all 47 species | |
| GSVIVT01024661001 | No alias | RNA biosynthesis.transcriptional activation.C2C2... | 0.06 | OrthoFinder output from all 47 species | |
| Gb_00164 | No alias | transcription factor (BBX-CO) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os03g50310.1 | LOC_Os03g50310 | transcription factor (BBX-CO) | 0.04 | OrthoFinder output from all 47 species | |
| Len_g23704 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g06124 | No alias | CMF transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g06152 | No alias | CMF transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g17180 | No alias | CMF transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g14113 | No alias | BBX class-III transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g24194 | No alias | CMF transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g28029 | No alias | BBX class-III transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g15539 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g17788 | No alias | CMF transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g60427 | No alias | BBX class-III transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g15685 | No alias | CMF transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g34850 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc04g007210.3.1 | Solyc04g007210 | transcription factor (BBX-CO) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc05g009310.3.1 | Solyc05g009310 | transcription factor (BBX-CO) | 0.05 | OrthoFinder output from all 47 species | |
| Solyc07g008540.3.1 | CIA2, Solyc07g008540 | transcription factor (BBX-CO) | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g52289 | No alias | BBX class-III transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e015732_P002 | Zm00001e015732 | transcription factor (BBX-CO) | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e030952_P002 | Zm00001e030952 | transcription factor (BBX-CO) | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | IEA | Interproscan |
| MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005215 | transporter activity | IEP | HCCA |
| CC | GO:0009521 | photosystem | IEP | HCCA |
| CC | GO:0009523 | photosystem II | IEP | HCCA |
| CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | HCCA |
| BP | GO:0015979 | photosynthesis | IEP | HCCA |
| MF | GO:0016491 | oxidoreductase activity | IEP | HCCA |
| CC | GO:0019898 | extrinsic component of membrane | IEP | HCCA |
| MF | GO:0022857 | transmembrane transporter activity | IEP | HCCA |
| MF | GO:0051536 | iron-sulfur cluster binding | IEP | HCCA |
| MF | GO:0051540 | metal cluster binding | IEP | HCCA |
| BP | GO:0055085 | transmembrane transport | IEP | HCCA |
| CC | GO:1990204 | oxidoreductase complex | IEP | HCCA |
| No external refs found! |
