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  5. LOC_Os02g51620.1

LOC_Os02g51620.1 (LOC_Os02g51620)


Aliases : LOC_Os02g51620

Description : bifunctional alpha-L-arabinofuranosidase and beta-D-xylosidase (BXL)


Gene families : OG0001022 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001022_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g51620.1
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00246460 XYL4, ATBXL4,... Cell wall.pectin.rhamnogalacturonan I.modification and... 0.03 OrthoFinder output from all 47 species
AMTR_s00045p00064060 evm_27.TU.AmTr_v1... Cell wall.pectin.rhamnogalacturonan I.modification and... 0.03 OrthoFinder output from all 47 species
AMTR_s00057p00049120 ATBXL2, BXL2,... Cell wall.pectin.rhamnogalacturonan I.modification and... 0.03 OrthoFinder output from all 47 species
AMTR_s00125p00113140 evm_27.TU.AmTr_v1... Cell wall.pectin.rhamnogalacturonan I.modification and... 0.04 OrthoFinder output from all 47 species
AT1G02640 ATBXL2, BXL2 beta-xylosidase 2 0.02 OrthoFinder output from all 47 species
Ala_g25839 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Als_g16446 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g04438 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0120.g046802 No alias EC_3.2 glycosylase & original description: CDS=147-2696 0.04 OrthoFinder output from all 47 species
Ceric.31G017600.1 Ceric.31G017600 EC_3.2 glycosylase & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.31G017800.1 Ceric.31G017800 EC_3.2 glycosylase & original description:... 0.05 OrthoFinder output from all 47 species
Dac_g20398 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g10191 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01009003001 No alias Cell wall.pectin.rhamnogalacturonan I.modification and... 0.02 OrthoFinder output from all 47 species
GSVIVT01017658001 BXL3, BX3, XYL3,... Cell wall.pectin.rhamnogalacturonan I.modification and... 0.03 OrthoFinder output from all 47 species
GSVIVT01017659001 No alias Cell wall.pectin.rhamnogalacturonan I.modification and... 0.03 OrthoFinder output from all 47 species
GSVIVT01028104001 ATBXL2, BXL2 Cell wall.pectin.rhamnogalacturonan I.modification and... 0.06 OrthoFinder output from all 47 species
GSVIVT01037844001 No alias Cell wall.pectin.rhamnogalacturonan I.modification and... 0.02 OrthoFinder output from all 47 species
Gb_31967 No alias bifunctional alpha-L-arabinofuranosidase and... 0.02 OrthoFinder output from all 47 species
Gb_32463 XYL4, ATBXL4 bifunctional alpha-L-arabinofuranosidase and... 0.03 OrthoFinder output from all 47 species
Gb_34864 XYL4, ATBXL4 bifunctional alpha-L-arabinofuranosidase and... 0.04 OrthoFinder output from all 47 species
LOC_Os01g19220.1 ATBXL2, BXL2,... bifunctional alpha-L-arabinofuranosidase and... 0.04 OrthoFinder output from all 47 species
LOC_Os04g44840.1 LOC_Os04g44840 bifunctional alpha-L-arabinofuranosidase and... 0.02 OrthoFinder output from all 47 species
LOC_Os04g54810.1 XYL4, ATBXL4,... bifunctional alpha-L-arabinofuranosidase and... 0.04 OrthoFinder output from all 47 species
LOC_Os11g18730.1 LOC_Os11g18730 bifunctional alpha-L-arabinofuranosidase and... 0.04 OrthoFinder output from all 47 species
LOC_Os11g19160.1 LOC_Os11g19160 bifunctional alpha-L-arabinofuranosidase and... 0.04 OrthoFinder output from all 47 species
LOC_Os11g44950.2 ATBXL2, BXL2,... bifunctional alpha-L-arabinofuranosidase and... 0.04 OrthoFinder output from all 47 species
Len_g05441 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g29235 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
MA_10430067g0010 XYL4, ATBXL4 bifunctional alpha-L-arabinofuranosidase and... 0.05 OrthoFinder output from all 47 species
MA_39151g0010 XYL4, ATBXL4 bifunctional alpha-L-arabinofuranosidase and... 0.02 OrthoFinder output from all 47 species
MA_791061g0010 No alias bifunctional alpha-L-arabinofuranosidase and... 0.03 OrthoFinder output from all 47 species
Mp5g02880.1 XYL4, ATBXL4 bifunctional alpha-L-arabinofuranosidase and... 0.06 OrthoFinder output from all 47 species
Mp5g15680.1 No alias bifunctional alpha-L-arabinofuranosidase and... 0.03 OrthoFinder output from all 47 species
Nbi_g25216 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g26394 BXL3, BX3, XYL3,... EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g36714 XYL4, ATBXL4 EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g43289 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06957 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g10735 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0021.g008480 No alias EC_3.2 glycosylase & original description: CDS=1-2670 0.03 OrthoFinder output from all 47 species
Sam_g12561 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g24375 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Solyc04g072850.4.1 Solyc04g072850 bifunctional alpha-L-arabinofuranosidase and... 0.06 OrthoFinder output from all 47 species
Spa_g08645 XYL4, ATBXL4 EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g42434 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g08893 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e007432_P001 Zm00001e007432 bifunctional alpha-L-arabinofuranosidase and... 0.03 OrthoFinder output from all 47 species
Zm00001e008876_P002 Zm00001e008876 bifunctional alpha-L-arabinofuranosidase and... 0.02 OrthoFinder output from all 47 species
Zm00001e015868_P001 Zm00001e015868 bifunctional alpha-L-arabinofuranosidase and... 0.07 OrthoFinder output from all 47 species
Zm00001e037605_P001 ATBXL2, BXL2,... bifunctional alpha-L-arabinofuranosidase and... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
BP GO:0006417 regulation of translation IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
BP GO:0009890 negative regulation of biosynthetic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010608 post-transcriptional regulation of gene expression IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
BP GO:0017148 negative regulation of translation IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0030597 RNA glycosylase activity IEP HCCA
MF GO:0030598 rRNA N-glycosylase activity IEP HCCA
BP GO:0031324 negative regulation of cellular metabolic process IEP HCCA
BP GO:0031327 negative regulation of cellular biosynthetic process IEP HCCA
BP GO:0034248 regulation of amide metabolic process IEP HCCA
BP GO:0034249 negative regulation of amide metabolic process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048523 negative regulation of cellular process IEP HCCA
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051248 negative regulation of protein metabolic process IEP HCCA
MF GO:0140102 catalytic activity, acting on a rRNA IEP HCCA
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP HCCA
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR026891 Fn3-like 703 772
IPR002772 Glyco_hydro_3_C 405 634
IPR001764 Glyco_hydro_3_N 111 361
No external refs found!