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  5. LOC_Os02g52780.1

LOC_Os02g52780.1 (ABF2, ATAREB1, AREB1,...)


Aliases : ABF2, ATAREB1, AREB1, LOC_Os02g52780

Description : transcription factor (bZIP)


Gene families : OG0000314 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000314_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g52780.1

Target Alias Description ECC score Gene Family Method Actions
AT1G45249 ABF2, ATAREB1, AREB1 abscisic acid responsive elements-binding factor 2 0.08 OrthoFinder output from all 47 species
AT3G19290 AREB2, ABF4 ABRE binding factor 4 0.03 OrthoFinder output from all 47 species
AT4G34000 DPBF5, ABF3 abscisic acid responsive elements-binding factor 3 0.08 OrthoFinder output from all 47 species
Aev_g05446 AREB2, ABF4 bZIP class-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g05469 AREB2, ABF4 bZIP class-A transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene31919.t1 ABF1, Aspi01Gene31919 bZIP class-A transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.19G009600.1 ABF2, ATAREB1,... bZIP class-A transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dcu_g02694 ABF2, ATAREB1, AREB1 bZIP class-A transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g02975 DPBF3, AREB3 bZIP class-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g22019 ABF2, ATAREB1, AREB1 bZIP class-A transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01009485001 ABF2, ATAREB1, AREB1 RNA biosynthesis.transcriptional activation.bZIP... 0.09 OrthoFinder output from all 47 species
Gb_16168 ABF2, ATAREB1, AREB1 transcription factor (bZIP) 0.06 OrthoFinder output from all 47 species
Len_g03850 ABF2, ATAREB1, AREB1 bZIP class-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Len_g10696 ABF2, ATAREB1, AREB1 bZIP class-A transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Len_g46528 ABF1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g12563 ABF2, ATAREB1, AREB1 bZIP class-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g66546 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0101.g019760 ABF2, ATAREB1, AREB1 bZIP class-A transcription factor & original... 0.02 OrthoFinder output from all 47 species
Smo444199 DPBF2, AtbZIP67 RNA biosynthesis.transcriptional activation.bZIP... 0.03 OrthoFinder output from all 47 species
Solyc01g104650.3.1 GBF4, Solyc01g104650 transcription factor (bZIP) 0.04 OrthoFinder output from all 47 species
Solyc02g083520.2.1 ATBZIP27,... transcription factor (bZIP) 0.03 OrthoFinder output from all 47 species
Solyc04g078840.3.1 ABF2, ATAREB1,... transcription factor (bZIP) 0.06 OrthoFinder output from all 47 species
Solyc09g009490.4.1 ABI5, GIA1,... transcription factor (bZIP) 0.03 OrthoFinder output from all 47 species
Tin_g00763 ABF1 bZIP class-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e003794_P001 ABF2, ATAREB1,... transcription factor (bZIP) 0.03 OrthoFinder output from all 47 species
Zm00001e015956_P002 ABF2, ATAREB1,... transcription factor (bZIP) 0.11 OrthoFinder output from all 47 species
Zm00001e019163_P004 GBF4, Zm00001e019163 transcription factor (bZIP) 0.05 OrthoFinder output from all 47 species
Zm00001e022136_P001 ABF2, ATAREB1,... transcription factor (bZIP) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001101 response to acid chemical IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
BP GO:0009415 response to water IEP HCCA
BP GO:0009628 response to abiotic stimulus IEP HCCA
BP GO:0010035 response to inorganic substance IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:1901700 response to oxygen-containing compound IEP HCCA
InterPro domains Description Start Stop
IPR004827 bZIP 277 327
No external refs found!