Aliases : THO5, AtTHO5, LOC_Os02g52820
Description : component THOC5 of mRNP trafficking THO subcomplex
Gene families : OG0003012 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003012_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Aev_g08053 | THO5, AtTHO5 | component *(THOC5) of mRNP trafficking THO subcomplex &... | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g11464 | THO5, AtTHO5 | component *(THOC5) of mRNP trafficking THO subcomplex &... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.27G022600.1 | THO5, AtTHO5,... | component *(THOC5) of mRNP trafficking THO subcomplex &... | 0.03 | OrthoFinder output from all 47 species | |
| Cre17.g705550 | THO5, AtTHO5 | RNA processing.messenger ribonucleoprotein particle... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_36955 | THO5, AtTHO5 | component THOC5 of mRNP trafficking THO subcomplex | 0.03 | OrthoFinder output from all 47 species | |
| Len_g10726 | THO5, AtTHO5 | component *(THOC5) of mRNP trafficking THO subcomplex &... | 0.04 | OrthoFinder output from all 47 species | |
| MA_10360933g0020 | AtTLP7, TLP7 | transcription factor (TUB) | 0.01 | OrthoFinder output from all 47 species | |
| MA_10426101g0010 | THO5, AtTHO5 | component THOC5 of mRNP trafficking THO subcomplex | 0.03 | OrthoFinder output from all 47 species | |
| Mp8g03190.1 | THO5, AtTHO5 | component THOC5 of mRNP trafficking THO subcomplex | 0.05 | OrthoFinder output from all 47 species | |
| Pnu_g06721 | THO5, AtTHO5 | component *(THOC5) of mRNP trafficking THO subcomplex &... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc04g078830.3.1 | THO5, AtTHO5,... | component THOC5 of mRNP trafficking THO subcomplex | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e015958_P003 | THO5, AtTHO5,... | component THOC5 of mRNP trafficking THO subcomplex | 0.07 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000151 | ubiquitin ligase complex | IEP | HCCA |
| CC | GO:0000152 | nuclear ubiquitin ligase complex | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005643 | nuclear pore | IEP | HCCA |
| CC | GO:0005680 | anaphase-promoting complex | IEP | HCCA |
| BP | GO:0006913 | nucleocytoplasmic transport | IEP | HCCA |
| BP | GO:0007346 | regulation of mitotic cell cycle | IEP | HCCA |
| BP | GO:0010564 | regulation of cell cycle process | IEP | HCCA |
| MF | GO:0016409 | palmitoyltransferase activity | IEP | HCCA |
| MF | GO:0017056 | structural constituent of nuclear pore | IEP | HCCA |
| BP | GO:0030071 | regulation of mitotic metaphase/anaphase transition | IEP | HCCA |
| CC | GO:0031461 | cullin-RING ubiquitin ligase complex | IEP | HCCA |
| CC | GO:0032991 | protein-containing complex | IEP | HCCA |
| BP | GO:0033043 | regulation of organelle organization | IEP | HCCA |
| BP | GO:0033044 | regulation of chromosome organization | IEP | HCCA |
| BP | GO:0033045 | regulation of sister chromatid segregation | IEP | HCCA |
| BP | GO:0046907 | intracellular transport | IEP | HCCA |
| BP | GO:0051128 | regulation of cellular component organization | IEP | HCCA |
| BP | GO:0051169 | nuclear transport | IEP | HCCA |
| BP | GO:0051641 | cellular localization | IEP | HCCA |
| BP | GO:0051649 | establishment of localization in cell | IEP | HCCA |
| BP | GO:0051726 | regulation of cell cycle | IEP | HCCA |
| BP | GO:0051983 | regulation of chromosome segregation | IEP | HCCA |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
| CC | GO:0140535 | intracellular protein-containing complex | IEP | HCCA |
| BP | GO:1901987 | regulation of cell cycle phase transition | IEP | HCCA |
| BP | GO:1901990 | regulation of mitotic cell cycle phase transition | IEP | HCCA |
| BP | GO:1902099 | regulation of metaphase/anaphase transition of cell cycle | IEP | HCCA |
| CC | GO:1902494 | catalytic complex | IEP | HCCA |
| CC | GO:1990234 | transferase complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR019163 | THO_Thoc5 | 78 | 433 |
| No external refs found! |
