LOC_Os02g54490.1 (LOC_Os02g54490)


Aliases : LOC_Os02g54490

Description : component APC4 of (APC/C)-dependent ubiquitination platform subcomplex


Gene families : OG0006357 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006357_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g54490.1

Target Alias Description ECC score Gene Family Method Actions
AT4G21530 No alias Transducin/WD40 repeat-like superfamily protein 0.02 OrthoFinder output from all 47 species
Aspi01Gene60164.t1 Aspi01Gene60164 component *(APC4) of (APC/C)-dependent ubiquitination... 0.02 OrthoFinder output from all 47 species
Azfi_s0074.g037392 No alias component *(APC4) of (APC/C)-dependent ubiquitination... 0.05 OrthoFinder output from all 47 species
Ceric.02G071700.1 Ceric.02G071700 component *(APC4) of (APC/C)-dependent ubiquitination... 0.04 OrthoFinder output from all 47 species
Cre12.g556650 No alias Cell cycle.mitosis and meiosis.metaphase to anaphase... 0.02 OrthoFinder output from all 47 species
Dde_g03446 No alias component *(APC4) of (APC/C)-dependent ubiquitination... 0.02 OrthoFinder output from all 47 species
MA_10427063g0010 No alias component APC4 of (APC/C)-dependent ubiquitination... 0.06 OrthoFinder output from all 47 species
Mp6g18880.1 No alias component APC4 of (APC/C)-dependent ubiquitination... 0.03 OrthoFinder output from all 47 species
Ppi_g15762 No alias component *(APC4) of (APC/C)-dependent ubiquitination... 0.04 OrthoFinder output from all 47 species
Sam_g10422 No alias component *(APC4) of (APC/C)-dependent ubiquitination... 0.03 OrthoFinder output from all 47 species
Smo89017 No alias Cell cycle.mitosis and meiosis.metaphase to anaphase... 0.03 OrthoFinder output from all 47 species
Solyc02g079050.3.1 Solyc02g079050 component APC4 of (APC/C)-dependent ubiquitination... 0.04 OrthoFinder output from all 47 species
Zm00001e023738_P003 Zm00001e023738 component APC4 of (APC/C)-dependent ubiquitination... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0043015 gamma-tubulin binding IEP HCCA
InterPro domains Description Start Stop
IPR024790 APC4_long_dom 236 415
IPR024977 Apc4_WD40_dom 3 88
No external refs found!