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  5. LOC_Os02g54560.1

LOC_Os02g54560.1 (LOC_Os02g54560)


Aliases : LOC_Os02g54560

Description : Pathogenesis-related protein PRB1-3 OS=Hordeum vulgare (sp|p35793|pr13_horvu : 141.0)


Gene families : OG0000174 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000174_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g54560.1
Cluster HCCA: Cluster_141

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00263950 evm_27.TU.AmTr_v1... Pathogenesis-related protein PR-1 OS=Medicago truncatula 0.03 OrthoFinder output from all 47 species
AMTR_s00019p00199580 evm_27.TU.AmTr_v1... Pathogenesis-related protein PR-1 OS=Medicago truncatula 0.05 OrthoFinder output from all 47 species
AMTR_s00019p00199860 evm_27.TU.AmTr_v1... Pathogenesis-related protein PR-1 OS=Medicago truncatula 0.03 OrthoFinder output from all 47 species
AMTR_s00019p00200490 evm_27.TU.AmTr_v1... Pathogenesis-related protein PR-1 OS=Medicago truncatula 0.08 OrthoFinder output from all 47 species
AMTR_s00019p00200890 evm_27.TU.AmTr_v1... Pathogenesis-related protein PR-1 OS=Medicago truncatula 0.03 OrthoFinder output from all 47 species
AMTR_s00021p00244110 evm_27.TU.AmTr_v1... Pathogenesis-related protein PR-1 OS=Medicago truncatula 0.03 OrthoFinder output from all 47 species
AMTR_s00029p00197310 evm_27.TU.AmTr_v1... Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum 0.05 OrthoFinder output from all 47 species
AT1G01310 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.03 OrthoFinder output from all 47 species
AT2G14580 PRB1, ATPRB1 basic pathogenesis-related protein 1 0.03 OrthoFinder output from all 47 species
AT2G19990 PR-1-LIKE pathogenesis-related protein-1-like 0.03 OrthoFinder output from all 47 species
AT3G09590 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.03 OrthoFinder output from all 47 species
AT3G19690 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.03 OrthoFinder output from all 47 species
AT4G25790 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.04 OrthoFinder output from all 47 species
AT4G30320 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.05 OrthoFinder output from all 47 species
AT4G31470 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.06 OrthoFinder output from all 47 species
AT4G33730 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.05 OrthoFinder output from all 47 species
AT5G02730 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.03 OrthoFinder output from all 47 species
AT5G57625 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.04 OrthoFinder output from all 47 species
AT5G66590 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.07 OrthoFinder output from all 47 species
Ala_g21397 No alias CAPE precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g57903 No alias CAPE precursor polypeptide & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene14794.t1 Aspi01Gene14794 CAPE precursor polypeptide & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene52884.t1 Aspi01Gene52884 CAPE precursor polypeptide & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene71537.t1 Aspi01Gene71537 CAPE precursor polypeptide & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g05029 No alias CAPE precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g06229 No alias CAPE precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.17G082100.1 Ceric.17G082100 CAPE precursor polypeptide & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.18G062700.1 Ceric.18G062700 CAPE precursor polypeptide & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.18G062900.1 Ceric.18G062900 CAPE precursor polypeptide & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.18G063000.1 Ceric.18G063000 CAPE precursor polypeptide & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.25G027800.1 Ceric.25G027800 CAPE precursor polypeptide & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.25G027900.1 Ceric.25G027900 CAPE precursor polypeptide & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.25G028000.1 Ceric.25G028000 CAPE precursor polypeptide & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g13654 No alias CAPE precursor polypeptide & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g25605 No alias CAPE precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g33701 No alias CAPE precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g03077 No alias CAPE precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g08251 No alias CAPE precursor polypeptide & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g08900 No alias CAPE precursor polypeptide & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01003762001 No alias STS14 protein OS=Solanum tuberosum 0.06 OrthoFinder output from all 47 species
GSVIVT01025577001 No alias Pathogenesis-related protein 1C OS=Nicotiana tabacum 0.03 OrthoFinder output from all 47 species
GSVIVT01029124001 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula 0.02 OrthoFinder output from all 47 species
GSVIVT01036993001 No alias Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum 0.04 OrthoFinder output from all 47 species
GSVIVT01037011001 No alias Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum 0.03 OrthoFinder output from all 47 species
GSVIVT01037014001 No alias Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum 0.04 OrthoFinder output from all 47 species
GSVIVT01038540001 PRB1, ATPRB1 Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum 0.03 OrthoFinder output from all 47 species
Gb_07639 No alias STS14 protein OS=Solanum tuberosum (sp|q41495|st14_soltu : 159.0) 0.03 OrthoFinder output from all 47 species
Gb_11047 No alias Pathogenesis-related protein 1A OS=Nicotiana tabacum... 0.04 OrthoFinder output from all 47 species
Gb_11048 No alias Pathogenesis-related protein 1A OS=Nicotiana tabacum... 0.03 OrthoFinder output from all 47 species
Gb_11051 No alias Pathogenesis-related protein 1A OS=Nicotiana tabacum... 0.03 OrthoFinder output from all 47 species
Gb_11053 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.04 OrthoFinder output from all 47 species
Gb_11054 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.03 OrthoFinder output from all 47 species
Gb_16215 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.03 OrthoFinder output from all 47 species
LOC_Os01g28500.1 ATPR1, PR1, PR... Pathogenesis-related protein PRMS OS=Zea mays... 0.05 OrthoFinder output from all 47 species
LOC_Os02g54570.1 LOC_Os02g54570 Pathogenesis-related protein 1 OS=Hordeum vulgare... 0.04 OrthoFinder output from all 47 species
LOC_Os04g22210.1 PRB1, ATPRB1,... Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.04 OrthoFinder output from all 47 species
LOC_Os07g03279.1 LOC_Os07g03279 Basic form of pathogenesis-related protein 1... 0.05 OrthoFinder output from all 47 species
LOC_Os07g03458.1 LOC_Os07g03458 Basic form of pathogenesis-related protein 1... 0.05 OrthoFinder output from all 47 species
LOC_Os07g03680.1 LOC_Os07g03680 Pathogenesis-related protein 1B OS=Nicotiana tabacum... 0.04 OrthoFinder output from all 47 species
Len_g34865 No alias CAPE precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
MA_10356677g0010 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.04 OrthoFinder output from all 47 species
MA_10392069g0010 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.04 OrthoFinder output from all 47 species
MA_10428480g0010 No alias Basic form of pathogenesis-related protein 1... 0.03 OrthoFinder output from all 47 species
MA_175771g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_178424g0010 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.03 OrthoFinder output from all 47 species
MA_300767g0010 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.02 OrthoFinder output from all 47 species
MA_53673g0010 No alias Pathogenesis-related protein 1B OS=Nicotiana tabacum... 0.03 OrthoFinder output from all 47 species
MA_54271g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_77819g0010 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.03 OrthoFinder output from all 47 species
Mp3g14110.1 ATPR1, PR1, PR 1 Pathogenesis-related protein 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Mp3g14130.1 ATPR1, PR1, PR 1 Pathogenesis-related protein 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Mp5g12540.1 No alias Pathogenesis-related protein 1C OS=Nicotiana tabacum... 0.05 OrthoFinder output from all 47 species
Mp5g16820.1 No alias Basic form of pathogenesis-related protein 1... 0.06 OrthoFinder output from all 47 species
Mp6g06400.1 No alias Pathogenesis-related protein 1 OS=Hordeum vulgare... 0.02 OrthoFinder output from all 47 species
Mp7g06810.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp7g13960.1 No alias Pathogenesis-related protein PRMS OS=Zea mays... 0.03 OrthoFinder output from all 47 species
Msp_g02307 No alias CAPE precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g38284 No alias CAPE precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g44565 No alias CAPE precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g05517 PRB1, ATPRB1 CAPE precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g14007 No alias CAPE precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g24600 No alias CAPE precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c11_1180V3.1 Pp3c11_1180 CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.02 OrthoFinder output from all 47 species
Ppi_g05598 No alias CAPE precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0015.g006515 No alias CAPE precursor polypeptide & original description: CDS=1-528 0.07 OrthoFinder output from all 47 species
Smo100429 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula 0.02 OrthoFinder output from all 47 species
Smo230161 PRB1, ATPRB1 Pathogenesis-related protein 1C OS=Nicotiana tabacum 0.02 OrthoFinder output from all 47 species
Smo233855 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula 0.04 OrthoFinder output from all 47 species
Smo76987 No alias Pathogenesis-related protein PR-1 type OS=Sambucus nigra 0.02 OrthoFinder output from all 47 species
Solyc01g106600.2.1 Solyc01g106600 Basic form of pathogenesis-related protein 1... 0.03 OrthoFinder output from all 47 species
Solyc01g106605.1.1 Solyc01g106605 Pathogenesis-related protein 1A1 OS=Solanum lycopersicum... 0.03 OrthoFinder output from all 47 species
Solyc01g106640.2.1 Solyc01g106640 Basic form of pathogenesis-related protein 1... 0.03 OrthoFinder output from all 47 species
Solyc09g006005.1.1 ATPR1, PR1, PR... Pathogenesis-related leaf protein 4 OS=Solanum... 0.03 OrthoFinder output from all 47 species
Solyc10g048100.3.1 Solyc10g048100 Pathogenesis-related protein 1B OS=Nicotiana tabacum... 0.02 OrthoFinder output from all 47 species
Tin_g29537 No alias CAPE precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g36983 No alias CAPE precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g41417 No alias CAPE precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g44859 No alias CAPE precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e002028_P001 ATPR1, PR1, PR... Pathogenesis-related protein PRMS OS=Zea mays... 0.05 OrthoFinder output from all 47 species
Zm00001e008453_P001 Zm00001e008453 Pathogenesis-related protein 1A1 OS=Solanum lycopersicum... 0.04 OrthoFinder output from all 47 species
Zm00001e016073_P001 Zm00001e016073 Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.05 OrthoFinder output from all 47 species
Zm00001e016075_P001 Zm00001e016075 Pathogenesis-related protein 1 OS=Hordeum vulgare... 0.04 OrthoFinder output from all 47 species
Zm00001e017920_P002 PRB1, ATPRB1,... Pathogenesis-related protein 1A1 OS=Solanum lycopersicum... 0.02 OrthoFinder output from all 47 species
Zm00001e023732_P001 Zm00001e023732 Pathogenesis-related protein 1 OS=Hordeum vulgare... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
InterPro domains Description Start Stop
IPR014044 CAP_domain 64 187
No external refs found!