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  5. LOC_Os02g55480.1

LOC_Os02g55480.1 (LOC_Os02g55480)


Aliases : LOC_Os02g55480

Description : no hits & (original description: none)


Gene families : OG0000957 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000957_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g55480.1
Cluster HCCA: Cluster_173

Target Alias Description ECC score Gene Family Method Actions
AT2G15580 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
Als_g22504 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene11704.t1 Aspi01Gene11704 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.22G025500.1 Ceric.22G025500 not classified & original description: pacid=50615262... 0.04 OrthoFinder output from all 47 species
Dcu_g40060 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g02752 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_19820 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os11g37230.1 LOC_Os11g37230 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Len_g15338 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g27907 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g16624 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g22883 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g37088 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g107290.3.1 Solyc01g107290 Probable E3 ubiquitin-protein ligase RHY1A... 0.02 OrthoFinder output from all 47 species
Spa_g12079 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e009715_P001 Zm00001e009715 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 151 193
No external refs found!