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  5. LOC_Os02g57000.1

LOC_Os02g57000.1 (LOC_Os02g57000)


Aliases : LOC_Os02g57000

Description : no hits & (original description: none)


Gene families : OG0000271 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000271_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g57000.1
Cluster HCCA: Cluster_103

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00077p00167680 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT1G04540 No alias Calcium-dependent lipid-binding (CaLB domain) family protein 0.03 OrthoFinder output from all 47 species
AT2G13350 No alias Calcium-dependent lipid-binding (CaLB domain) family protein 0.04 OrthoFinder output from all 47 species
AT3G04360 No alias Calcium-dependent lipid-binding (CaLB domain) family protein 0.03 OrthoFinder output from all 47 species
Adi_g058831 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.35G051000.1 Ceric.35G051000 not classified & original description: pacid=50582063... 0.03 OrthoFinder output from all 47 species
GSVIVT01027920001 No alias No description available 0.04 OrthoFinder output from all 47 species
Solyc09g090920.4.1 Solyc09g090920 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc12g096970.2.1 Solyc12g096970 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
BP GO:0006534 cysteine metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009092 homoserine metabolic process IEP HCCA
BP GO:0019346 transsulfuration IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0050667 homocysteine metabolic process IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000008 C2_dom 29 124
No external refs found!