Aliases : LPA66, LOC_Os02g58330
Description : Putative pentatricopeptide repeat-containing protein At3g15930 OS=Arabidopsis thaliana (sp|q9lsb8|pp235_arath : 276.0)
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: LOC_Os02g58330.1 | |
| Cluster | HCCA: Cluster_163 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Adi_g036802 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g054256 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g056630 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g099319 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g13651 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g18203 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g27648 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g32888 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ala_g04237 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g06921 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g13294 | VAC1, ECB2, ATECB2 | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g17036 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g24397 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g24705 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g30900 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g32891 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g35754 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g35854 | REME1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g38174 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g07129 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g14144 | REME1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g05250 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g05294 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene25992.t1 | Aspi01Gene25992 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene43949.t2 | OTP84, Aspi01Gene43949 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene65088.t1 | Aspi01Gene65088 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0005.g009227 | No alias | not classified & original description: CDS=1-1950 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0503.g073910 | No alias | not classified & original description: CDS=59-2179 | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g34432 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.02G047700.1 | Ceric.02G047700 | not classified & original description: pacid=50586056... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.07G044100.1 | RARE1, Ceric.07G044100 | not classified & original description: pacid=50626680... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.08G020400.1 | OTP84, Ceric.08G020400 | not classified & original description: pacid=50638334... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.09G007000.1 | Ceric.09G007000 | not classified & original description: pacid=50586983... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.11G080200.1 | Ceric.11G080200 | not classified & original description: pacid=50595969... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.18G077100.1 | Ceric.18G077100 | not classified & original description: pacid=50621411... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.1Z028800.1 | Ceric.1Z028800 | not classified & original description: pacid=50582143... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.1Z239000.1 | Ceric.1Z239000 | not classified & original description: pacid=50639198... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.21G054200.1 | Ceric.21G054200 | not classified & original description: pacid=50602892... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.26G013000.1 | Ceric.26G013000 | not classified & original description: pacid=50600010... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.27G036800.1 | VAC1, ECB2,... | not classified & original description: pacid=50605276... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.29G017400.1 | Ceric.29G017400 | not classified & original description: pacid=50625928... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.29G048500.1 | Ceric.29G048500 | not classified & original description: pacid=50625078... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.30G012500.1 | Ceric.30G012500 | not classified & original description: pacid=50608997... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.30G071500.1 | Ceric.30G071500 | not classified & original description: pacid=50609206... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.39G004000.1 | EMB2758, Ceric.39G004000 | not classified & original description: pacid=50582620... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g03810 | OTP86 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g32204 | OSB3 | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g07739 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g15506 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g22836 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g00984 | OSB3 | cofactor of plastid-encoded RNA polymerase *(TAC9) &... | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g06075 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g17712 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g23295 | REME1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g24510 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g26396 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g25270.1 | OTP84, LOC_Os01g25270 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os12g08140.1 | LOC_Os12g08140 | Pentatricopeptide repeat-containing protein At2g33760... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g04325 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g05348 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g25856 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g30755 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g44141 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g59017 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g14103 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g32657 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g36746 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g34210 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g18027 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g42976 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g02370 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g36408 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g13524 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g53095 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g57368 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g64428 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g03353 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g22601 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g26686 | REME1 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g30639 | OTP84 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g12921 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g27968 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g45358 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g62370 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0019.g007831 | No alias | not classified & original description: CDS=364-1791 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0024.g009141 | No alias | not classified & original description: CDS=1-2487 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s1579.g028098 | No alias | not classified & original description: CDS=1-249 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g07845 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g19039 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g21956 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g24307 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g27765 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g48011 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g50908 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Smo16626 | No alias | Pentatricopeptide repeat-containing protein At4g16835,... | 0.02 | OrthoFinder output from all 47 species | |
| Smo34484 | No alias | Pentatricopeptide repeat-containing protein At3g46790,... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g53369 | EMB2758 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g10341 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g24970 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g26547 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g28558 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g35082 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g35685 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e014549_P001 | CRR22, Zm00001e014549 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e030605_P001 | Zm00001e030605 | Pentatricopeptide repeat-containing protein At1g31430... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| No external refs found! |
