LOC_Os03g02040.1 (LOC_Os03g02040)


Aliases : LOC_Os03g02040

Description : no hits & (original description: none)


Gene families : OG0000526 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000526_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g02040.1

Target Alias Description ECC score Gene Family Method Actions
AT3G48940 No alias Remorin family protein 0.05 OrthoFinder output from all 47 species
Adi_g102519 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g117288 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g118073 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g04326 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g33238 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g02159 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g00306 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g50861 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.35G046700.1 Ceric.35G046700 not classified & original description: pacid=50581722... 0.03 OrthoFinder output from all 47 species
Dcu_g41134 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g42996 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g13372 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g48279 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g00620 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01019785001 No alias Remorin OS=Solanum tuberosum 0.13 OrthoFinder output from all 47 species
GSVIVT01026869001 No alias Uncharacterized protein At3g61260 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Len_g08631 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g50832 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g57392 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g01320 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g10566 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g05160 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g16515 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g04721 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g45215 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g01503 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g06752 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g25809 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g24973 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06776 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g08904 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g09748 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g60948 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005937 No alias not classified & original description: CDS=1-372 0.04 OrthoFinder output from all 47 species
Spa_g00381 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g08097 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g38180 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g46489 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e000088_P001 Zm00001e000088 Remorin OS=Solanum tuberosum (sp|p93788|remo_soltu : 97.1) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
MF GO:0070569 uridylyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR005518 Remorin_N 11 59
IPR005516 Remorin_C 66 168
No external refs found!