LOC_Os03g04920.1 (ATABCC5, MRP5,...)

Aliases : ATABCC5, MRP5, ATMRP5, ABCC5, LOC_Os03g04920

Description : subfamily ABCC transporter

Gene families : OG0000037 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os03g04920.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00039p00164500	evm_27.TU.AmTr_v1...	ABC transporter C family member 5 OS=Arabidopsis thaliana	0.04	OrthoFinder output from all 47 species
AMTR_s00092p00037330	AtABCC2, ABCC2,...	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
AT1G30420	ATMRP12, MRP12, ABCC11	multidrug resistance-associated protein 12	0.03	OrthoFinder output from all 47 species
Aev_g12312	ATABCC5, MRP5,...	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Als_g07445	EST3, MRP4, ATMRP4, ABCC4	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g34007	ATABCC5, MRP5,...	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g29783	ATABCC5, MRP5,...	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene05227.t2	ATMRP12, MRP12,...	EC_4.1 carbon-carbon lyase & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene30341.t1	MRP6, ATMRP6,...	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene64352.t2	AtABCC2, ABCC2,...	glutathione S-conjugate transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene67415.t1	EST3, MRP4,...	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g02741	EST3, MRP4, ATMRP4, ABCC4	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g24652	ATABCC5, MRP5,...	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.21G019800.1	EST3, MRP4,...	subfamily ABCC transporter & original description:...	0.03	OrthoFinder output from all 47 species
Cre03.g174050	ABCC12, MRP13, ATMRP13	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species
Dac_g05534	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Dac_g27864	ABCC3, ATMRP3, MRP3	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g02038	MRP11, ABCC13, ATMRP11	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01021594001	AtABCC2, ABCC2,...	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
GSVIVT01028722001	ATMRP14, ABCC10, MRP14	Solute transport.primary active transport.ABC...	0.04	OrthoFinder output from all 47 species
Gb_14726	MRP6, ATMRP6, ABCC8	ABC transporter C family member 8 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Gb_38871	ABCC3, ATMRP3, MRP3	subfamily ABCC transporter	0.03	OrthoFinder output from all 47 species
LOC_Os01g25386.1	EST3, MRP4,...	subfamily ABCC transporter	0.04	OrthoFinder output from all 47 species
Len_g10742	MRP6, ATMRP6, ABCC8	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
MA_10436190g0040	ATMRP14, ABCC10, MRP14	ABC transporter C family member 10 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
MA_602830g0010	ATMRP14, ABCC10, MRP14	ABC transporter C family member 10 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Mp4g11950.1	ATABCC5, MRP5,...	subfamily ABCC transporter	0.02	OrthoFinder output from all 47 species
Mp7g13400.1	MRP10, ATMRP10, ABCC14	subfamily ABCC transporter	0.02	OrthoFinder output from all 47 species
Msp_g14029	MRP6, ATMRP6, ABCC8	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g05007	ATABCC5, MRP5,...	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g23776	MRP9, ABCC9, ATMRP9	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g43853	ATABCC5, MRP5,...	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g15997	ATMRP12, MRP12, ABCC11	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g23052	ATMRP14, ABCC10, MRP14	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g01415	AtABCC2, ABCC2,...	glutathione S-conjugate transporter & original description: none	0.05	OrthoFinder output from all 47 species
Sacu_v1.1_s0008.g004014	MRP6, ATMRP6, ABCC8	subfamily ABCC transporter & original description: CDS=118-4101	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0074.g017297	ATMRP12, MRP12, ABCC11	subfamily ABCC transporter & original description: CDS=111-3830	0.02	OrthoFinder output from all 47 species
Sam_g08067	No alias	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g46933	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Smo144775	ATABCC5, MRP5,...	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
Smo163776	ATABCC5, MRP5,...	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
Smo402326	ATABCC5, MRP5,...	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
Smo405957	AtABCC2, ABCC2,...	ABC transporter C family member 2 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
Smo81581	AtABCC2, ABCC2,...	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
Solyc07g065320.4.1	ABCC3, ATMRP3,...	subfamily ABCC transporter	0.03	OrthoFinder output from all 47 species
Solyc08g006880.3.1	AtABCC2, ABCC2,...	subfamily ABCC transporter	0.04	OrthoFinder output from all 47 species
Solyc09g075020.3.1	EST3, MRP4,...	subfamily ABCC transporter	0.03	OrthoFinder output from all 47 species
Solyc10g024420.3.1	MRP9, ABCC9,...	subfamily ABCC transporter	0.03	OrthoFinder output from all 47 species
Tin_g12692	AtABCC2, ABCC2,...	glutathione S-conjugate transporter & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e000347_P001	ATABCC5, MRP5,...	subfamily ABCC transporter	0.03	OrthoFinder output from all 47 species
Zm00001e038918_P002	ABCC3, ATMRP3,...	subfamily ABCC transporter	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0003700	DNA-binding transcription factor activity	IEP	HCCA
BP	GO:0006355	regulation of DNA-templated transcription	IEP	HCCA
BP	GO:0009889	regulation of biosynthetic process	IEP	HCCA
BP	GO:0010468	regulation of gene expression	IEP	HCCA
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	HCCA
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0019222	regulation of metabolic process	IEP	HCCA
MF	GO:0019842	vitamin binding	IEP	HCCA
MF	GO:0030170	pyridoxal phosphate binding	IEP	HCCA
BP	GO:0031323	regulation of cellular metabolic process	IEP	HCCA
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	HCCA
BP	GO:0050789	regulation of biological process	IEP	HCCA
BP	GO:0050794	regulation of cellular process	IEP	HCCA
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	HCCA
BP	GO:0051252	regulation of RNA metabolic process	IEP	HCCA
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	HCCA
BP	GO:0065007	biological regulation	IEP	HCCA
MF	GO:0070279	vitamin B6 binding	IEP	HCCA
BP	GO:0080090	regulation of primary metabolic process	IEP	HCCA
MF	GO:0140110	transcription regulator activity	IEP	HCCA
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	HCCA
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR011527	ABC1_TM_dom	311	577
IPR011527	ABC1_TM_dom	946	1185
IPR003439	ABC_transporter-like_ATP-bd	1279	1427
IPR003439	ABC_transporter-like_ATP-bd	641	775

External Links

No external refs found!

LOC_Os03g04920.1 (ATABCC5, MRP5,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation