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  5. LOC_Os03g04950.1

LOC_Os03g04950.1 (SDD1, LOC_Os03g04950)


Aliases : SDD1, LOC_Os03g04950

Description : protease (SBT1)


Gene families : OG0000027 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g04950.1

Target Alias Description ECC score Gene Family Method Actions
AT5G44530 No alias Subtilase family protein 0.05 OrthoFinder output from all 47 species
Ceric.16G007400.1 Ceric.16G007400 protease *(SBT1) & original description: pacid=50590121... 0.1 OrthoFinder output from all 47 species
Dcu_g05778 No alias protease *(SBT1) & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os06g41880.1 AIR3, LOC_Os06g41880 Subtilisin-like protease SBT1.6 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Pnu_g24505 SLP2 not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEA Interproscan
BP GO:0006508 proteolysis IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
InterPro domains Description Start Stop
IPR000209 Peptidase_S8/S53_dom 145 621
IPR010259 S8pro/Inhibitor_I9 31 121
IPR003137 PA_domain 392 475
IPR041469 Subtilisin-like_FN3 678 778
No external refs found!