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  5. LOC_Os03g06900.1

LOC_Os03g06900.1 (AtTOP3alpha, TOP3A,...)


Aliases : AtTOP3alpha, TOP3A, LOC_Os03g06900

Description : topoisomerase component TOP3-alpha of RTR Holliday junction dissolution complex


Gene families : OG0002141 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002141_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g06900.1

Target Alias Description ECC score Gene Family Method Actions
Zm00001e034601_P002 Zm00001e034601 topoisomerase component TOP3b of TDRD3-TOP3B... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003916 DNA topoisomerase activity IEA Interproscan
BP GO:0006265 DNA topological change IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0018995 host cellular component IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR006171 TOPRIM_domain 13 158
IPR013497 Topo_IA_cen 487 564
IPR013497 Topo_IA_cen 175 474
No external refs found!