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  5. LOC_Os03g07880.1

LOC_Os03g07880.1 (NF-YA6, LOC_Os03g07880)


Aliases : NF-YA6, LOC_Os03g07880

Description : component NF-YA of NF-Y transcription factor complex


Gene families : OG0000451 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000451_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g07880.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00195160 NFYA5, NF-YA5,... RNA biosynthesis.transcriptional activation.NF-Y... 0.03 OrthoFinder output from all 47 species
AT3G05690 ATHAP2B, NF-YA2,... nuclear factor Y, subunit A2 0.06 OrthoFinder output from all 47 species
AT5G06510 NF-YA10 nuclear factor Y, subunit A10 0.08 OrthoFinder output from all 47 species
Adi_g019327 NF-YA7 component *(NF-YA) of NF-Y transcription factor complex... 0.01 OrthoFinder output from all 47 species
Aev_g18870 NF-YA7 component *(NF-YA) of NF-Y transcription factor complex... 0.01 OrthoFinder output from all 47 species
Aop_g13377 NF-YA7 component *(NF-YA) of NF-Y transcription factor complex... 0.02 OrthoFinder output from all 47 species
Azfi_s0112.g045798 NF-YA9 component *(NF-YA) of NF-Y transcription factor complex... 0.03 OrthoFinder output from all 47 species
GSVIVT01016790001 HAP2C, NF-YA3, ATHAP2C RNA biosynthesis.transcriptional activation.NF-Y... 0.03 OrthoFinder output from all 47 species
GSVIVT01022601001 NF-YA10 RNA biosynthesis.transcriptional activation.NF-Y... 0.03 OrthoFinder output from all 47 species
GSVIVT01033313001 HAP2A, ATHAP2A,... RNA biosynthesis.transcriptional activation.NF-Y... 0.03 OrthoFinder output from all 47 species
Gb_27081 NF-YA7 component NF-YA of NF-Y transcription factor complex 0.04 OrthoFinder output from all 47 species
Gb_31427 NF-YA7 component NF-YA of NF-Y transcription factor complex 0.05 OrthoFinder output from all 47 species
Gb_31428 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_32704 NF-YA7 component NF-YA of NF-Y transcription factor complex 0.05 OrthoFinder output from all 47 species
Gb_32705 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os02g53620.1 NFYA5, NF-YA5,... component NF-YA of NF-Y transcription factor complex 0.03 OrthoFinder output from all 47 species
LOC_Os07g06470.2 NF-YA10, LOC_Os07g06470 component NF-YA of NF-Y transcription factor complex 0.04 OrthoFinder output from all 47 species
Lfl_g21288 NF-YA7 component *(NF-YA) of NF-Y transcription factor complex... 0.03 OrthoFinder output from all 47 species
Lfl_g22791 NF-YA7 component *(NF-YA) of NF-Y transcription factor complex... 0.02 OrthoFinder output from all 47 species
MA_10431570g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_17313g0010 NF-YA7 component NF-YA of NF-Y transcription factor complex 0.03 OrthoFinder output from all 47 species
MA_608139g0010 NF-YA7 component NF-YA of NF-Y transcription factor complex 0.03 OrthoFinder output from all 47 species
MA_72133g0010 NF-YA7 component NF-YA of NF-Y transcription factor complex 0.02 OrthoFinder output from all 47 species
Msp_g09391 NF-YA7 component *(NF-YA) of NF-Y transcription factor complex... 0.03 OrthoFinder output from all 47 species
Nbi_g07832 NF-YA7 component *(NF-YA) of NF-Y transcription factor complex... 0.02 OrthoFinder output from all 47 species
Nbi_g26123 NF-YA7 component *(NF-YA) of NF-Y transcription factor complex... 0.02 OrthoFinder output from all 47 species
Pir_g24962 HAP2A, ATHAP2A,... component *(NF-YA) of NF-Y transcription factor complex... 0.02 OrthoFinder output from all 47 species
Zm00001e001966_P001 NF-YA6, Zm00001e001966 component NF-YA of NF-Y transcription factor complex 0.02 OrthoFinder output from all 47 species
Zm00001e003259_P001 NF-YA10, Zm00001e003259 component NF-YA of NF-Y transcription factor complex 0.04 OrthoFinder output from all 47 species
Zm00001e005004_P001 NF-YA10, Zm00001e005004 component NF-YA of NF-Y transcription factor complex 0.04 OrthoFinder output from all 47 species
Zm00001e005342_P003 NF-YA7, Zm00001e005342 component NF-YA of NF-Y transcription factor complex 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008519 ammonium transmembrane transporter activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001289 NFYA 138 193
No external refs found!