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  5. LOC_Os03g09150.1

LOC_Os03g09150.1 (PUM7, APUM7, LOC_Os03g09150)


Aliases : PUM7, APUM7, LOC_Os03g09150

Description : Putative pumilio homolog 7, chloroplastic OS=Arabidopsis thaliana (sp|q9c9r6|pum7_arath : 345.0)


Gene families : OG0000858 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000858_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g09150.1

Target Alias Description ECC score Gene Family Method Actions
LOC_Os11g37090.1 APUM12, PUM12,... Pumilio homolog 12 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Zm00001e024450_P001 APUM12, PUM12,... Pumilio homolog 12 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR001313 Pumilio_RNA-bd_rpt 541 573
IPR001313 Pumilio_RNA-bd_rpt 427 460
IPR001313 Pumilio_RNA-bd_rpt 611 636
IPR001313 Pumilio_RNA-bd_rpt 581 598
IPR001313 Pumilio_RNA-bd_rpt 474 500
IPR001313 Pumilio_RNA-bd_rpt 504 536
IPR001313 Pumilio_RNA-bd_rpt 393 424
No external refs found!