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  5. LOC_Os03g09220.1

LOC_Os03g09220.1 (LOC_Os03g09220)


Aliases : LOC_Os03g09220

Description : Probable protein phosphatase 2C BIPP2C1 OS=Oryza sativa subsp. japonica (sp|q10ql5|bip2c_orysj : 897.0)


Gene families : OG0000571 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000571_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g09220.1

Target Alias Description ECC score Gene Family Method Actions
AT4G33500 No alias Protein phosphatase 2C family protein 0.04 OrthoFinder output from all 47 species
Ala_g06302 No alias phosphatase *(PBCP) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g32280 No alias phosphatase *(PBCP) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g39097 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g08345 No alias phosphatase *(PBCP) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g20128 No alias phosphatase *(PBCP) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene62676.t1 Aspi01Gene62676 phosphatase *(PBCP) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g68354 No alias component *(eL29) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Cre06.g257850 No alias Photosynthesis.photophosphorylation.photosystem... 0.02 OrthoFinder output from all 47 species
Dac_g09847 No alias phosphatase *(PBCP) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g33331 No alias phosphatase *(PBCP) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g26968 No alias phosphatase *(PBCP) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g17993 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g20278 No alias phosphatase *(PBCP) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g17211 No alias phosphatase *(PBCP) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g05138 No alias phosphatase *(PBCP) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g04619 No alias phosphatase *(PBCP) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g12898 No alias phosphatase *(PBCP) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g24669 No alias phosphatase *(PBCP) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g105020.3.1 Solyc01g105020 Probable protein phosphatase 2C 71 OS=Oryza sativa... 0.06 OrthoFinder output from all 47 species
Zm00001e016822_P004 Zm00001e016822 photosynthetic acclimation PBCP phosphatase 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001932 PPM-type_phosphatase-like_dom 382 591
No external refs found!