Aliases : LOC_Os03g09230
Description : xylogen-type arabinogalactan protein
Gene families : OG0000195 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000195_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00002p00240480 | evm_27.TU.AmTr_v1... | Cell wall.cell wall proteins.hydroxyproline-rich... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00119p00120480 | evm_27.TU.AmTr_v1... | Cell wall.cell wall proteins.hydroxyproline-rich... | 0.06 | OrthoFinder output from all 47 species | |
| AT1G55260 | No alias | Bifunctional inhibitor/lipid-transfer protein/seed... | 0.02 | OrthoFinder output from all 47 species | |
| AT1G62790 | No alias | Bifunctional inhibitor/lipid-transfer protein/seed... | 0.04 | OrthoFinder output from all 47 species | |
| AT1G73550 | No alias | Bifunctional inhibitor/lipid-transfer protein/seed... | 0.03 | OrthoFinder output from all 47 species | |
| AT2G13820 | No alias | Bifunctional inhibitor/lipid-transfer protein/seed... | 0.03 | OrthoFinder output from all 47 species | |
| AT2G44290 | No alias | Bifunctional inhibitor/lipid-transfer protein/seed... | 0.04 | OrthoFinder output from all 47 species | |
| AT2G48130 | No alias | Bifunctional inhibitor/lipid-transfer protein/seed... | 0.03 | OrthoFinder output from all 47 species | |
| AT2G48140 | EDA4 | Bifunctional inhibitor/lipid-transfer protein/seed... | 0.03 | OrthoFinder output from all 47 species | |
| AT3G22620 | No alias | Bifunctional inhibitor/lipid-transfer protein/seed... | 0.06 | OrthoFinder output from all 47 species | |
| Adi_g012882 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g42840 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g04739 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g35665 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0054.g033620 | No alias | not classified & original description: CDS=175-666 | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g02877 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g24057 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.01G102400.1 | Ceric.01G102400 | not classified & original description: pacid=50593041... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.12G092600.1 | Ceric.12G092600 | not classified & original description: pacid=50601501... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.12G092700.1 | Ceric.12G092700 | not classified & original description: pacid=50601364... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.35G030300.1 | Ceric.35G030300 | not classified & original description: pacid=50581753... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g39682 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Dcu_g16309 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g22872 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g24627 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g06369 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Gb_02455 | No alias | xylogen-type arabinogalactan protein | 0.05 | OrthoFinder output from all 47 species | |
| Gb_11754 | No alias | xylogen-type arabinogalactan protein | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os06g49770.1 | LOC_Os06g49770 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| Len_g14614 | No alias | arabinogalactan protein *(Xylogen) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_10069449g0010 | No alias | xylogen-type arabinogalactan protein | 0.03 | OrthoFinder output from all 47 species | |
| MA_26320g0020 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g07639 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g06116 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g17108 | No alias | arabinogalactan protein *(Xylogen) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g49765 | No alias | arabinogalactan protein *(Xylogen) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g19919 | No alias | arabinogalactan protein *(Xylogen) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0022.g008667 | No alias | not classified & original description: CDS=1-402 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0056.g014600 | No alias | not classified & original description: CDS=65-802 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0073.g017064 | No alias | arabinogalactan protein *(Xylogen) & original... | 0.05 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0169.g024327 | No alias | not classified & original description: CDS=1-432 | 0.06 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0169.g024328 | No alias | not classified & original description: CDS=429-857 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0169.g024331 | No alias | not classified & original description: CDS=1491-1979 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s2896.g028490 | No alias | not classified & original description: CDS=1-624 | 0.05 | OrthoFinder output from all 47 species | |
| Sam_g02332 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Solyc08g007460.3.1 | Solyc08g007460 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc08g079250.4.1 | Solyc08g079250 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e001521_P002 | Zm00001e001521 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e001853_P001 | Zm00001e001853 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e011463_P001 | Zm00001e011463 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e030289_P001 | Zm00001e030289 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e038813_P001 | Zm00001e038813 | xylogen-type arabinogalactan protein | 0.06 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000041 | transition metal ion transport | IEP | HCCA |
| MF | GO:0005375 | copper ion transmembrane transporter activity | IEP | HCCA |
| BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
| BP | GO:0006825 | copper ion transport | IEP | HCCA |
| MF | GO:0030247 | polysaccharide binding | IEP | HCCA |
| BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
| BP | GO:0034220 | monoatomic ion transmembrane transport | IEP | HCCA |
| BP | GO:0035434 | copper ion transmembrane transport | IEP | HCCA |
| MF | GO:0046873 | metal ion transmembrane transporter activity | IEP | HCCA |
| MF | GO:0046915 | transition metal ion transmembrane transporter activity | IEP | HCCA |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:0098655 | monoatomic cation transmembrane transport | IEP | HCCA |
| BP | GO:0098660 | inorganic ion transmembrane transport | IEP | HCCA |
| BP | GO:0098662 | inorganic cation transmembrane transport | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR016140 | Bifunc_inhib/LTP/seed_store | 43 | 131 |
| No external refs found! |
