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  5. LOC_Os03g10870.1

LOC_Os03g10870.1 (LOC_Os03g10870)


Aliases : LOC_Os03g10870

Description : CASP-like protein 5A1 OS=Oryza sativa subsp. japonica (sp|q10q78|csplv_orysj : 245.0)


Gene families : OG0001512 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001512_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g10870.1
Cluster HCCA: Cluster_75

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0045.g029748 No alias not classified & original description: CDS=402-932 0.03 OrthoFinder output from all 47 species
Ceric.06G080800.1 Ceric.06G080800 not classified & original description: pacid=50619058... 0.03 OrthoFinder output from all 47 species
Dcu_g14457 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g06652 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01016270001 No alias CASP-like protein 5A2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Ore_g07214 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g10426 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e012905_P002 Zm00001e012905 CASP-like protein 5A3 OS=Zea mays (sp|b4fns3|csplk_maize : 190.0) 0.03 OrthoFinder output from all 47 species
Zm00001e026916_P001 Zm00001e026916 CASP-like protein 5B2 OS=Zea mays (sp|b6tax2|cspln_maize : 237.0) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR006702 CASP_dom 35 163
No external refs found!