1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os03g12460.1

LOC_Os03g12460.1 (LOC_Os03g12460)


Aliases : LOC_Os03g12460

Description : component COG6 of COG (Conserved-Oligomeric Golgi) complex


Gene families : OG0006382 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006382_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g12460.1
Cluster HCCA: Cluster_143

Target Alias Description ECC score Gene Family Method Actions
Adi_g020669 No alias component *(COG6) of COG (Conserved-Oligomeric Golgi)... 0.07 OrthoFinder output from all 47 species
Aev_g04050 No alias component *(COG6) of COG (Conserved-Oligomeric Golgi)... 0.04 OrthoFinder output from all 47 species
Ala_g03847 No alias component *(COG6) of COG (Conserved-Oligomeric Golgi)... 0.03 OrthoFinder output from all 47 species
Als_g01013 No alias component *(COG6) of COG (Conserved-Oligomeric Golgi)... 0.07 OrthoFinder output from all 47 species
Cba_g02026 No alias component *(COG6) of COG (Conserved-Oligomeric Golgi)... 0.03 OrthoFinder output from all 47 species
Ceric.21G025900.1 Ceric.21G025900 component *(COG6) of COG (Conserved-Oligomeric Golgi)... 0.15 OrthoFinder output from all 47 species
Cre13.g587750 No alias Vesicle trafficking.target membrane tethering.COG... 0.04 OrthoFinder output from all 47 species
Dde_g04871 No alias component *(COG6) of COG (Conserved-Oligomeric Golgi)... 0.03 OrthoFinder output from all 47 species
Ehy_g03923 No alias component *(COG6) of COG (Conserved-Oligomeric Golgi)... 0.03 OrthoFinder output from all 47 species
GSVIVT01013198001 No alias Vesicle trafficking.target membrane tethering.COG... 0.13 OrthoFinder output from all 47 species
Gb_06250 No alias component COG6 of COG (Conserved-Oligomeric Golgi) complex 0.03 OrthoFinder output from all 47 species
Lfl_g04129 No alias component *(COG6) of COG (Conserved-Oligomeric Golgi)... 0.11 OrthoFinder output from all 47 species
MA_20241g0020 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp7g15380.1 No alias component COG6 of COG (Conserved-Oligomeric Golgi) complex 0.17 OrthoFinder output from all 47 species
Ore_g09011 No alias component *(COG6) of COG (Conserved-Oligomeric Golgi)... 0.06 OrthoFinder output from all 47 species
Sam_g14936 No alias component *(COG6) of COG (Conserved-Oligomeric Golgi)... 0.07 OrthoFinder output from all 47 species
Smo183082 No alias Vesicle trafficking.target membrane tethering.COG... 0.11 OrthoFinder output from all 47 species
Solyc08g075440.4.1 Solyc08g075440 component COG6 of COG (Conserved-Oligomeric Golgi) complex 0.22 OrthoFinder output from all 47 species
Spa_g11268 No alias component *(COG6) of COG (Conserved-Oligomeric Golgi)... 0.05 OrthoFinder output from all 47 species
Zm00001e000904_P002 Zm00001e000904 component COG6 of COG (Conserved-Oligomeric Golgi) complex 0.14 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006891 intra-Golgi vesicle-mediated transport IEA Interproscan
CC GO:0017119 Golgi transport complex IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0015031 protein transport IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030119 AP-type membrane coat adaptor complex IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030126 COPI vesicle coat IEP HCCA
CC GO:0030131 clathrin adaptor complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0033218 amide binding IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
MF GO:0120227 acyl-CoA binding IEP HCCA
MF GO:1901567 fatty acid derivative binding IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
InterPro domains Description Start Stop
IPR010490 COG6 30 687
No external refs found!