LOC_Os03g19270.1 (LOC_Os03g19270)


Aliases : LOC_Os03g19270

Description : no hits & (original description: none)


Gene families : OG0000063 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000063_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g19270.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00142420 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00135p00026790 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT3G03270 No alias Adenine nucleotide alpha hydrolases-like superfamily protein 0.09 OrthoFinder output from all 47 species
AT3G62550 No alias Adenine nucleotide alpha hydrolases-like superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g048388 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g048389 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g01816 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g19519 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g38955 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g44724 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g54544 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g35791 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g67662 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene00449.t1 Aspi01Gene00449 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0007.g010938 No alias not classified & original description: CDS=155-715 0.04 OrthoFinder output from all 47 species
Cba_g27633 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cre12.g542350 PHOS32, ATPHOS32 No description available 0.02 OrthoFinder output from all 47 species
Dac_g26303 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g03582 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g23531 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g23687 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g45675 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g00336 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g26079 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01027993001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01031226001 No alias No description available 0.12 OrthoFinder output from all 47 species
GSVIVT01031228001 No alias No description available 0.09 OrthoFinder output from all 47 species
Gb_20331 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Gb_33859 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_37405 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Gb_37409 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Gb_37413 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os05g28740.1 LOC_Os05g28740 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Lfl_g26258 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_114091g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_14296g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_32640g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_5004g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g23590 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g25803 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g54924 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g58299 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g02621 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g20282 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g08722 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g100370.3.1 Solyc01g100370 no hits & (original description: none) 0.11 OrthoFinder output from all 47 species
Solyc04g014600.3.1 Solyc04g014600 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Spa_g16647 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e040676_P001 Zm00001e040676 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0002161 aminoacyl-tRNA editing activity IEP HCCA
MF GO:0004420 hydroxymethylglutaryl-CoA reductase (NADPH) activity IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0015936 coenzyme A metabolic process IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030976 thiamine pyrophosphate binding IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
MF GO:0050997 quaternary ammonium group binding IEP HCCA
MF GO:0051499 D-aminoacyl-tRNA deacylase activity IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
InterPro domains Description Start Stop
IPR006016 UspA 14 191
No external refs found!