Aliases : LOC_Os03g21840
Description : ER-associated protein (Reticulon)
Gene families : OG0000272 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000272_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00077p00178230 | evm_27.TU.AmTr_v1... | Reticulon-like protein B5 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g016803 | RTNLB2, BTI2 | ER-tubule curvature-inducing protein *(Reticulon) &... | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g020106 | No alias | ER-tubule curvature-inducing protein *(Reticulon) &... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g01137 | RTNLB2, BTI2 | ER-tubule curvature-inducing protein *(Reticulon) &... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g09568 | RTNLB2, BTI2 | ER-tubule curvature-inducing protein *(Reticulon) &... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.10G041900.1 | Ceric.10G041900 | ER-tubule curvature-inducing protein *(Reticulon) &... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g49784 | No alias | ER-tubule curvature-inducing protein *(Reticulon) &... | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g00607 | RTNLB2, BTI2 | ER-tubule curvature-inducing protein *(Reticulon) &... | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g03409 | RTNLB2, BTI2 | ER-tubule curvature-inducing protein *(Reticulon) &... | 0.02 | OrthoFinder output from all 47 species | |
| MA_10434136g0010 | No alias | ER-associated protein (Reticulon) | 0.02 | OrthoFinder output from all 47 species | |
| MA_133421g0010 | No alias | ER-associated protein (Reticulon) | 0.02 | OrthoFinder output from all 47 species | |
| MA_8439835g0010 | RTNLB4, BTI3 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Mp6g03260.1 | RTNLB2, BTI2 | ER-associated protein (Reticulon) | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g14633 | RTNLB2, BTI2 | ER-tubule curvature-inducing protein *(Reticulon) &... | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g27033 | RTNLB2, BTI2 | ER-tubule curvature-inducing protein *(Reticulon) &... | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g29195 | RTNLB2, BTI2 | ER-tubule curvature-inducing protein *(Reticulon) &... | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g37046 | BTI1, RTNLB1 | ER-tubule curvature-inducing protein *(Reticulon) &... | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g03384 | RTNLB2, BTI2 | ER-tubule curvature-inducing protein *(Reticulon) &... | 0.02 | OrthoFinder output from all 47 species | |
| Pp3c3_26340V3.1 | RTNLB3, Pp3c3_26340 | Reticulon family protein | 0.01 | OrthoFinder output from all 47 species | |
| Smo167511 | No alias | Reticulon-like protein B2 OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | |
| Solyc01g107620.4.1 | Solyc01g107620 | ER-associated protein (Reticulon) | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g08318 | RTNLB2, BTI2 | ER-tubule curvature-inducing protein *(Reticulon) &... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g48899 | RTNLB2, BTI2 | ER-tubule curvature-inducing protein *(Reticulon) &... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e031369_P001 | BTI1, RTNLB1,... | ER-associated protein (Reticulon) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004175 | endopeptidase activity | IEP | HCCA |
| MF | GO:0004252 | serine-type endopeptidase activity | IEP | HCCA |
| MF | GO:0004425 | indole-3-glycerol-phosphate synthase activity | IEP | HCCA |
| MF | GO:0005048 | signal sequence binding | IEP | HCCA |
| BP | GO:0006486 | protein glycosylation | IEP | HCCA |
| BP | GO:0006621 | protein retention in ER lumen | IEP | HCCA |
| MF | GO:0008417 | fucosyltransferase activity | IEP | HCCA |
| MF | GO:0016758 | hexosyltransferase activity | IEP | HCCA |
| MF | GO:0016830 | carbon-carbon lyase activity | IEP | HCCA |
| MF | GO:0016831 | carboxy-lyase activity | IEP | HCCA |
| BP | GO:0022607 | cellular component assembly | IEP | HCCA |
| BP | GO:0032507 | maintenance of protein location in cell | IEP | HCCA |
| MF | GO:0033218 | amide binding | IEP | HCCA |
| BP | GO:0035437 | maintenance of protein localization in endoplasmic reticulum | IEP | HCCA |
| MF | GO:0042277 | peptide binding | IEP | HCCA |
| BP | GO:0043413 | macromolecule glycosylation | IEP | HCCA |
| BP | GO:0043933 | protein-containing complex organization | IEP | HCCA |
| BP | GO:0045185 | maintenance of protein location | IEP | HCCA |
| MF | GO:0046923 | ER retention sequence binding | IEP | HCCA |
| BP | GO:0051235 | maintenance of location | IEP | HCCA |
| BP | GO:0051651 | maintenance of location in cell | IEP | HCCA |
| BP | GO:0065003 | protein-containing complex assembly | IEP | HCCA |
| BP | GO:0070070 | proton-transporting V-type ATPase complex assembly | IEP | HCCA |
| BP | GO:0070071 | proton-transporting two-sector ATPase complex assembly | IEP | HCCA |
| BP | GO:0070072 | vacuolar proton-transporting V-type ATPase complex assembly | IEP | HCCA |
| BP | GO:0070085 | glycosylation | IEP | HCCA |
| BP | GO:0072595 | maintenance of protein localization in organelle | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR003388 | Reticulon | 47 | 201 |
| No external refs found! |
