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  5. LOC_Os03g22600.1

LOC_Os03g22600.1 (LOC_Os03g22600)


Aliases : LOC_Os03g22600

Description : BTB/POZ domain-containing protein At1g03010 OS=Arabidopsis thaliana (sp|q9sa69|y1301_arath : 626.0)


Gene families : OG0000584 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000584_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g22600.1
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00005p00262560 evm_27.TU.AmTr_v1... BTB/POZ domain-containing protein At5g48800... 0.03 OrthoFinder output from all 47 species
AMTR_s00057p00189750 evm_27.TU.AmTr_v1... BTB/POZ domain-containing protein At1g03010... 0.04 OrthoFinder output from all 47 species
AT2G47860 No alias Phototropic-responsive NPH3 family protein 0.04 OrthoFinder output from all 47 species
AT3G49970 No alias Phototropic-responsive NPH3 family protein 0.05 OrthoFinder output from all 47 species
Ala_g18363 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g03145 No alias substrate adaptor *(NCL/NCH) of CUL3-BTB E3 ubiquitin... 0.02 OrthoFinder output from all 47 species
Als_g05663 No alias substrate adaptor *(NCL/NCH) of CUL3-BTB E3 ubiquitin... 0.04 OrthoFinder output from all 47 species
Als_g22647 No alias substrate adaptor of CUL3-BTB E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Als_g39222 No alias substrate adaptor *(NCL/NCH) of CUL3-BTB E3 ubiquitin... 0.02 OrthoFinder output from all 47 species
Aob_g11100 No alias substrate adaptor *(NRL) of CUL3-based E3 ubiquitin... 0.02 OrthoFinder output from all 47 species
Aop_g10641 No alias substrate adaptor *(NCL/NCH) of CUL3-BTB E3 ubiquitin... 0.03 OrthoFinder output from all 47 species
Aspi01Gene28639.t1 Aspi01Gene28639 substrate adaptor *(NCL/NCH) of CUL3-BTB E3 ubiquitin... 0.02 OrthoFinder output from all 47 species
Aspi01Gene66522.t1 Aspi01Gene66522 substrate adaptor *(NCL/NCH) of CUL3-BTB E3 ubiquitin... 0.04 OrthoFinder output from all 47 species
Azfi_s0002.g001664 No alias not classified & original description: CDS=1-2625 0.02 OrthoFinder output from all 47 species
Cba_g03271 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g17052 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g20694 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.09G078000.1 Ceric.09G078000 not classified & original description: pacid=50587188... 0.03 OrthoFinder output from all 47 species
Ceric.19G029600.1 Ceric.19G029600 not classified & original description: pacid=50576619... 0.02 OrthoFinder output from all 47 species
Ceric.25G051000.1 Ceric.25G051000 not classified & original description: pacid=50594195... 0.02 OrthoFinder output from all 47 species
Ceric.25G065200.1 Ceric.25G065200 not classified & original description: pacid=50593433... 0.03 OrthoFinder output from all 47 species
Ceric.26G037900.1 Ceric.26G037900 not classified & original description: pacid=50600061... 0.04 OrthoFinder output from all 47 species
Ceric.37G013500.1 Ceric.37G013500 substrate adaptor *(NCL/NCH) of CUL3-BTB E3 ubiquitin... 0.02 OrthoFinder output from all 47 species
Dac_g07287 No alias substrate adaptor *(NCL/NCH) of CUL3-BTB E3 ubiquitin... 0.04 OrthoFinder output from all 47 species
Dac_g08261 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g20411 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g24164 RPT3, NPH3, JK218 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01010983001 No alias BTB/POZ domain-containing protein At1g03010... 0.07 OrthoFinder output from all 47 species
GSVIVT01024541001 RPT2 Root phototropism protein 2 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Gb_00052 RPT2 Root phototropism protein 2 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Len_g15180 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10429476g0010 RPT2 BTB/POZ domain-containing protein SR1IP1 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_842546g0010 No alias BTB/POZ domain-containing protein At5g48800... 0.02 OrthoFinder output from all 47 species
Mp5g07060.1 No alias BTB/POZ domain-containing protein At5g48800... 0.02 OrthoFinder output from all 47 species
Msp_g37236 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g01164 No alias substrate adaptor *(NCL/NCH) of CUL3-BTB E3 ubiquitin... 0.02 OrthoFinder output from all 47 species
Nbi_g12476 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g03886 No alias substrate adaptor *(NCL/NCH) of CUL3-BTB E3 ubiquitin... 0.03 OrthoFinder output from all 47 species
Ppi_g17400 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g33070 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005763 No alias not classified & original description: CDS=977-2839 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0175.g024554 No alias not classified & original description: CDS=1-1890 0.03 OrthoFinder output from all 47 species
Smo231529 No alias BTB/POZ domain-containing protein At5g48800... 0.02 OrthoFinder output from all 47 species
Smo74933 No alias BTB/POZ domain-containing protein At5g48800... 0.02 OrthoFinder output from all 47 species
Solyc02g064720.3.1 Solyc02g064720 BTB/POZ domain-containing protein SR1IP1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc09g048980.4.1 Solyc09g048980 BTB/POZ domain-containing protein At3g08570... 0.03 OrthoFinder output from all 47 species
Solyc09g061250.4.1 Solyc09g061250 BTB/POZ domain-containing protein At5g48800... 0.02 OrthoFinder output from all 47 species
Solyc09g074630.3.1 Solyc09g074630 BTB/POZ domain-containing protein At1g03010... 0.03 OrthoFinder output from all 47 species
Spa_g29583 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g46290 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g14694 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e038209_P001 Zm00001e038209 BTB/POZ domain-containing protein At1g03010... 0.03 OrthoFinder output from all 47 species
Zm00001e039269_P001 Zm00001e039269 BTB/POZ domain-containing protein At3g08570... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
CC GO:0005875 microtubule associated complex IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009606 tropism IEP HCCA
BP GO:0010274 hydrotropism IEP HCCA
MF GO:0010333 terpene synthase activity IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP HCCA
MF GO:0020037 heme binding IEP HCCA
CC GO:0030286 dynein complex IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
InterPro domains Description Start Stop
IPR027356 NPH3_dom 223 501
No external refs found!