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  5. LOC_Os03g25200.1

LOC_Os03g25200.1 (LOC_Os03g25200)


Aliases : LOC_Os03g25200

Description : no hits & (original description: none)


Gene families : OG0000166 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000166_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g25200.1
Cluster HCCA: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g18200.1 LOC_Os01g18200 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g24530.1 LOC_Os01g24530 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g29710.1 LOC_Os01g29710 no hits & (original description: none) 0.11 OrthoFinder output from all 47 species
LOC_Os02g01420.1 LOC_Os02g01420 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os02g08280.1 LOC_Os02g08280 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os02g25370.1 LOC_Os02g25370 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os03g30080.1 LOC_Os03g30080 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os03g54020.1 LOC_Os03g54020 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os04g29440.1 LOC_Os04g29440 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os04g43590.1 LOC_Os04g43590 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os05g27034.1 LOC_Os05g27034 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os05g27860.1 LOC_Os05g27860 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
LOC_Os06g16900.1 LOC_Os06g16900 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os06g19310.1 LOC_Os06g19310 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os06g21000.1 LOC_Os06g21000 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
LOC_Os07g17510.1 LOC_Os07g17510 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os07g46120.1 LOC_Os07g46120 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
LOC_Os08g03730.1 LOC_Os08g03730 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os08g17120.1 LOC_Os08g17120 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os08g26280.1 LOC_Os08g26280 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
LOC_Os09g13560.1 LOC_Os09g13560 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
LOC_Os09g15610.1 LOC_Os09g15610 no hits & (original description: none) 0.11 OrthoFinder output from all 47 species
LOC_Os09g20130.1 LOC_Os09g20130 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os09g20450.1 LOC_Os09g20450 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
LOC_Os09g25240.1 LOC_Os09g25240 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os10g07554.1 LOC_Os10g07554 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os11g14350.1 LOC_Os11g14350 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
LOC_Os11g17410.1 LOC_Os11g17410 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os11g19550.1 LOC_Os11g19550 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os11g23810.1 LOC_Os11g23810 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os11g44100.1 LOC_Os11g44100 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os12g13080.1 LOC_Os12g13080 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os12g19210.1 LOC_Os12g19210 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os12g25300.1 LOC_Os12g25300 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os12g33060.1 PIN5, LOC_Os12g33060 auxin transporter (PIN). auxin efflux transporter (PIN) 0.06 OrthoFinder output from all 47 species
LOC_Os12g36480.1 LOC_Os12g36480 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
LOC_Os12g37240.1 LOC_Os12g37240 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEA Interproscan
MF GO:0008234 cysteine-type peptidase activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003653 Peptidase_C48_C 867 980
No external refs found!