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  5. LOC_Os03g25840.1

LOC_Os03g25840.1 (LOC_Os03g25840)


Aliases : LOC_Os03g25840

Description : amino acid transporter (LAT)


Gene families : OG0000891 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000891_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g25840.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00217p00020070 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.APC... 0.06 OrthoFinder output from all 47 species
Aev_g01252 No alias amino acid transporter *(LAT) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene11259.t1 Aspi01Gene11259 amino acid transporter *(LAT) & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os12g39080.1 LOC_Os12g39080 amino acid transporter (LAT) 0.05 OrthoFinder output from all 47 species
MA_10433440g0010 No alias amino acid transporter (LAT) 0.03 OrthoFinder output from all 47 species
MA_10433440g0030 No alias amino acid transporter (LAT) 0.03 OrthoFinder output from all 47 species
MA_192637g0010 No alias amino acid transporter (LAT) 0.03 OrthoFinder output from all 47 species
MA_24651g0010 No alias amino acid transporter (LAT) 0.04 OrthoFinder output from all 47 species
MA_42147g0010 No alias amino acid transporter (LAT) 0.04 OrthoFinder output from all 47 species
Solyc01g005900.2.1 Solyc01g005900 amino acid transporter (LAT) 0.06 OrthoFinder output from all 47 species
Tin_g03954 No alias amino acid transporter *(LAT) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e015550_P001 Zm00001e015550 amino acid transporter (LAT) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002293 AA/rel_permease1 74 300
No external refs found!