1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os03g28080.1

LOC_Os03g28080.1 (ATL3, LOC_Os03g28080)


Aliases : ATL3, LOC_Os03g28080

Description : RING-H2-class E3 ligase


Gene families : OG0000008 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g28080.1
Cluster HCCA: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00271850 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
AMTR_s00025p00229930 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
AMTR_s00044p00112360 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
AMTR_s00049p00223430 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
AMTR_s00088p00040490 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
AT1G22500 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
AT1G63840 No alias RING/U-box superfamily protein 0.04 OrthoFinder output from all 47 species
AT1G67856 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
AT2G17450 RHA3A RING-H2 finger A3A 0.03 OrthoFinder output from all 47 species
AT2G35000 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
AT2G44578 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G10910 No alias RING/U-box superfamily protein 0.02 OrthoFinder output from all 47 species
AT3G61550 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G09110 No alias RING/U-box superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G38140 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G05280 No alias RING/U-box superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G06490 No alias RING/U-box superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G07040 No alias RING/U-box superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g051114 No alias E3 ubiquitin ligase *(BRH) & original description: none 0.01 OrthoFinder output from all 47 species
Adi_g056858 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Adi_g091869 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Aev_g01255 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Aev_g12179 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Aev_g39979 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Als_g03725 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Als_g04740 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Als_g10161 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g14419 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Als_g17608 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Als_g30397 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g52149 ATL5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g52164 ATL8 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g04240 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g30636 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Aop_g07591 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Aop_g13275 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Aop_g14595 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Aop_g70090 ATL31, CNI1 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene12530.t1 Aspi01Gene12530 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene37208.t1 RHA3A, Aspi01Gene37208 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene46827.t1 ATL2, TL2,... RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene46835.t1 ATL2, TL2,... RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene65294.t1 Aspi01Gene65294 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Aspi01Gene65865.t1 Aspi01Gene65865 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene70839.t1 Aspi01Gene70839 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Azfi_s0006.g010071 No alias not classified & original description: CDS=1-183 0.02 OrthoFinder output from all 47 species
Azfi_s0098.g043930 No alias not classified & original description: CDS=29-547 0.03 OrthoFinder output from all 47 species
Cba_g03683 BRH1 E3 ubiquitin ligase *(BRH) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g03833 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Cba_g26664 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Cba_g32430 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Cba_g34751 BRH1 E3 ubiquitin ligase *(BRH) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g49099 BRH1 E3 ubiquitin ligase *(BRH) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g77129 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ceric.03G066200.1 Ceric.03G066200 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ceric.04G045600.1 Ceric.04G045600 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ceric.07G057600.1 Ceric.07G057600 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ceric.13G013700.1 RHA3A, Ceric.13G013700 not classified & original description: pacid=50636450... 0.01 OrthoFinder output from all 47 species
Ceric.13G075200.1 Ceric.13G075200 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ceric.22G021000.1 Ceric.22G021000 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ceric.22G061200.1 Ceric.22G061200 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ceric.22G061400.1 ATL2, TL2,... RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ceric.22G062000.1 Ceric.22G062000 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ceric.25G002800.1 Ceric.25G002800 not classified & original description: pacid=50594229... 0.03 OrthoFinder output from all 47 species
Ceric.25G030900.1 Ceric.25G030900 not classified & original description: pacid=50594363... 0.02 OrthoFinder output from all 47 species
Ceric.29G079800.1 Ceric.29G079800 not classified & original description: pacid=50625628... 0.04 OrthoFinder output from all 47 species
Dac_g14773 ATL31, CNI1 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Dcu_g02946 MEE16 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Dcu_g07519 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Dcu_g12448 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Dcu_g42850 XERICO not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g41558 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ehy_g00845 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ehy_g05299 BRH1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g07523 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ehy_g07562 XERICO not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g24499 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ehy_g26619 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ehy_g28199 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
GSVIVT01000015001 ATL6 Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
GSVIVT01000538001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
GSVIVT01009098001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
GSVIVT01020665001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 OrthoFinder output from all 47 species
GSVIVT01028038001 ATL2, TL2 Protein degradation.peptide tagging.Ubiquitin... 0.01 OrthoFinder output from all 47 species
Gb_05386 No alias RHA2 signal transducer of abscisic acid perception 0.02 OrthoFinder output from all 47 species
Gb_14777 No alias RING-H2-class E3 ligase 0.04 OrthoFinder output from all 47 species
Gb_14778 No alias RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Gb_36232 No alias IDF1 iron uptake IRT1-ubiquitin ligase 0.03 OrthoFinder output from all 47 species
LOC_Os01g11500.1 LOC_Os01g11500 RING-H2-class E3 ligase 0.04 OrthoFinder output from all 47 species
LOC_Os01g55110.1 LOC_Os01g55110 RING-H2-class E3 ligase 0.05 OrthoFinder output from all 47 species
LOC_Os02g33720.1 LOC_Os02g33720 RING-H2 finger protein ATL72 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os02g45780.1 LOC_Os02g45780 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os02g46100.1 LOC_Os02g46100 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
LOC_Os08g38460.1 XERICO, LOC_Os08g38460 ubiquitin protein ligase (XERICO) 0.04 OrthoFinder output from all 47 species
Len_g12736 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g23800 BRH1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g27111 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g27559 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g29042 XERICO not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10021g0010 No alias RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
MA_10426834g0010 No alias RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
MA_10431746g0020 No alias RING-H2 finger protein ATL78 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
MA_10435495g0010 No alias RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
MA_105533g0010 ATL8 RING-H2 finger protein ATL74 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_107765g0010 ATL6 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
MA_125507g0010 No alias RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
MA_129478g0010 BRH1 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
MA_1623327g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_184439g0010 No alias RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
MA_214717g0010 RHA3B no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_25345g0010 No alias RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
MA_31462g0010 No alias RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
MA_31736g0010 BRH1 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
MA_68992g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_6931619g0010 No alias RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
MA_92400g0010 RHA3B RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Mp5g08270.1 No alias RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Mp6g19130.1 ATL1F no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g05053 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g13489 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Msp_g42626 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Nbi_g19208 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ore_g06664 BRH1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g06948 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g14690 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ore_g17145 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g17146 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g18004 ATL5 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ore_g32953 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ore_g39132 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g41833 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Ore_g43979 ATL6 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Pir_g17726 ATL31, CNI1 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Pir_g23716 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Pir_g30102 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Pp3c23_1651V3.1 Pp3c23_1651 RING/U-box superfamily protein 0.01 OrthoFinder output from all 47 species
Ppi_g00620 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g24030 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002082 ATL8 not classified & original description: CDS=1-792 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0022.g008676 ATL4H not classified & original description: CDS=1-825 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0073.g017128 No alias not classified & original description: CDS=1-1311 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0074.g017298 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0158.g023798 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Sam_g08896 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Sam_g37113 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Smo96681 No alias Protein degradation.peptide tagging.Ubiquitin... 0.01 OrthoFinder output from all 47 species
Solyc01g095180.2.1 Solyc01g095180 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Solyc02g068415.1.1 RHA3A, Solyc02g068415 RING-H2 finger protein ATL73 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc03g005490.4.1 Solyc03g005490 RING-H2-class E3 ligase 0.01 OrthoFinder output from all 47 species
Solyc03g114090.1.1 Solyc03g114090 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Solyc03g114190.1.1 Solyc03g114190 RING-H2 finger protein ATL56 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc03g123690.1.1 Solyc03g123690 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc04g074820.3.1 Solyc04g074820 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Solyc05g018760.3.1 XERICO, Solyc05g018760 ubiquitin protein ligase (XERICO) 0.03 OrthoFinder output from all 47 species
Solyc08g008080.1.1 BRH1, Solyc08g008080 E3 ubiquitin-protein ligase RHA1B OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc08g082680.3.1 Solyc08g082680 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Solyc09g066300.3.1 Solyc09g066300 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Solyc09g075320.1.1 ATL2, TL2, Solyc09g075320 RING-H2-class E3 ligase 0.01 OrthoFinder output from all 47 species
Solyc11g005300.2.1 Solyc11g005300 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Solyc11g010330.3.1 Solyc11g010330 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Solyc11g066510.3.1 Solyc11g066510 RING-H2-class E3 ligase 0.01 OrthoFinder output from all 47 species
Solyc12g087840.1.1 Solyc12g087840 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Spa_g07577 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Spa_g08408 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Spa_g10422 BRH1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g38892 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g48427 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Spa_g51618 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Tin_g01893 No alias RING-H2-class ATL-subclass E3 ubiquiTin ligase &... 0.02 OrthoFinder output from all 47 species
Tin_g02554 No alias RING-H2-class ATL-subclass E3 ubiquiTin ligase &... 0.02 OrthoFinder output from all 47 species
Tin_g03901 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquiTin ligase &... 0.01 OrthoFinder output from all 47 species
Tin_g04482 No alias RING-H2-class ATL-subclass E3 ubiquiTin ligase &... 0.02 OrthoFinder output from all 47 species
Tin_g35018 No alias RING-H2-class ATL-subclass E3 ubiquiTin ligase &... 0.02 OrthoFinder output from all 47 species
Zm00001e001923_P001 ATL3, Zm00001e001923 RING-H2 finger protein ATL60 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e003426_P001 XERICO, Zm00001e003426 ubiquitin protein ligase (XERICO) 0.02 OrthoFinder output from all 47 species
Zm00001e007956_P001 ATRING1, RING1,... RING-H2-class E3 ligase 0.05 OrthoFinder output from all 47 species
Zm00001e007957_P001 ATL6, Zm00001e007957 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Zm00001e010029_P001 XERICO, Zm00001e010029 ubiquitin protein ligase (XERICO) 0.03 OrthoFinder output from all 47 species
Zm00001e010787_P001 ATL3, Zm00001e010787 RING-H2 finger protein ATL3 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e014764_P001 Zm00001e014764 RING-H2 finger protein ATL72 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e015449_P001 Zm00001e015449 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e016474_P001 Zm00001e016474 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Zm00001e017960_P001 RHA3A, Zm00001e017960 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e019779_P001 Zm00001e019779 RING-H2-class E3 ligase 0.05 OrthoFinder output from all 47 species
Zm00001e023234_P001 BRH1, Zm00001e023234 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e023515_P001 Zm00001e023515 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Zm00001e023585_P001 Zm00001e023585 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Zm00001e023832_P001 ATL31, CNI1,... RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Zm00001e031442_P001 Zm00001e031442 RING-H2-class E3 ligase 0.01 OrthoFinder output from all 47 species
Zm00001e031874_P001 Zm00001e031874 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e032186_P001 RHA3B, Zm00001e032186 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Zm00001e034421_P001 ATL6, Zm00001e034421 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Zm00001e034907_P001 Zm00001e034907 RING-H2 finger protein ATL80 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Zm00001e035560_P001 ATL3, Zm00001e035560 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Zm00001e036691_P001 Zm00001e036691 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Zm00001e041385_P001 Zm00001e041385 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Zm00001e041409_P001 BRH1, Zm00001e041409 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016846 carbon-sulfur lyase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 103 146
No external refs found!