LOC_Os03g29760.2 (NF-YA6, LOC_Os03g29760)

Aliases : NF-YA6, LOC_Os03g29760

Description : component NF-YA of NF-Y transcription factor complex

Gene families : OG0000451 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000451_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os03g29760.2

Target	Alias	Description	ECC score	Gene Family Method
AT1G72830	HAP2C, NF-YA3, ATHAP2C	nuclear factor Y, subunit A3	0.05	OrthoFinder output from all 47 species
AT3G05690	ATHAP2B, NF-YA2,...	nuclear factor Y, subunit A2	0.04	OrthoFinder output from all 47 species
AT3G14020	NF-YA6	nuclear factor Y, subunit A6	0.04	OrthoFinder output from all 47 species
AT3G20910	NF-YA9	nuclear factor Y, subunit A9	0.04	OrthoFinder output from all 47 species
Als_g12310	HAP2A, ATHAP2A,...	component *(NF-YA) of NF-Y transcription factor complex...	0.04	OrthoFinder output from all 47 species
Aop_g03133	NF-YA7	component *(NF-YA) of NF-Y transcription factor complex...	0.03	OrthoFinder output from all 47 species
Cba_g11720	NF-YA7	component *(NF-YA) of NF-Y transcription factor complex...	0.02	OrthoFinder output from all 47 species
GSVIVT01015120001	HAP2C, NF-YA3, ATHAP2C	RNA biosynthesis.transcriptional activation.NF-Y...	0.03	OrthoFinder output from all 47 species
GSVIVT01022601001	NF-YA10	RNA biosynthesis.transcriptional activation.NF-Y...	0.02	OrthoFinder output from all 47 species
Gb_23157	NF-YA7	component NF-YA of NF-Y transcription factor complex	0.03	OrthoFinder output from all 47 species
Gb_32704	NF-YA7	component NF-YA of NF-Y transcription factor complex	0.04	OrthoFinder output from all 47 species
LOC_Os07g41720.1	NF-YA8, LOC_Os07g41720	component NF-YA of NF-Y transcription factor complex	0.08	OrthoFinder output from all 47 species
Nbi_g07832	NF-YA7	component *(NF-YA) of NF-Y transcription factor complex...	0.03	OrthoFinder output from all 47 species
Sam_g35457	No alias	component *(NF-YA) of NF-Y transcription factor complex...	0.02	OrthoFinder output from all 47 species
Zm00001e003228_P001	NF-YA7, Zm00001e003228	component NF-YA of NF-Y transcription factor complex	0.05	OrthoFinder output from all 47 species
Zm00001e005342_P003	NF-YA7, Zm00001e005342	component NF-YA of NF-Y transcription factor complex	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004672	protein kinase activity	IEP	HCCA
BP	GO:0006468	protein phosphorylation	IEP	HCCA
BP	GO:0006793	phosphorus metabolic process	IEP	HCCA
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	HCCA
BP	GO:0007165	signal transduction	IEP	HCCA
MF	GO:0016301	kinase activity	IEP	HCCA
BP	GO:0016310	phosphorylation	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	HCCA
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	HCCA
BP	GO:0019538	protein metabolic process	IEP	HCCA
BP	GO:0036211	protein modification process	IEP	HCCA
BP	GO:0043412	macromolecule modification	IEP	HCCA
MF	GO:0140096	catalytic activity, acting on a protein	IEP	HCCA
BP	GO:1901564	organonitrogen compound metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001289	NFYA	164	219

External Links

No external refs found!

LOC_Os03g29760.2 (NF-YA6, LOC_Os03g29760)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation