Aliases : SHR, SGR7, LOC_Os03g31880
Description : transcription factor (GRAS). SHR gravity signalling transcription factor
Gene families : OG0003562 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003562_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00066p00182770 | SHR, SGR7,... | External stimuli response.gravity.sensing and... | 0.05 | OrthoFinder output from all 47 species | |
| AT4G37650 | SHR, SGR7 | GRAS family transcription factor | 0.06 | OrthoFinder output from all 47 species | |
| Aob_g17904 | SHR, SGR7 | gravity signalling transcription factor *(SHR) &... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g04274 | SHR, SGR7 | gravity signalling transcription factor *(SHR) &... | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene15940.t1 | SHR, SGR7,... | gravity signalling transcription factor *(SHR) &... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.38G001000.1 | SHR, SGR7,... | gravity signalling transcription factor *(SHR) &... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_17251 | SHR, SGR7 | transcription factor (GRAS). SHR gravity signalling... | 0.07 | OrthoFinder output from all 47 species | |
| MA_99004g0010 | SHR, SGR7 | transcription factor (GRAS) | 0.05 | OrthoFinder output from all 47 species | |
| MA_99004g0020 | SHR, SGR7 | transcription factor (GRAS). SHR gravity signalling... | 0.05 | OrthoFinder output from all 47 species | |
| Solyc02g092370.1.1 | SHR, SGR7, Solyc02g092370 | transcription factor (GRAS). SHR gravity signalling... | 0.06 | OrthoFinder output from all 47 species | |
| Solyc08g014030.1.1 | SHR, SGR7, Solyc08g014030 | transcription factor (GRAS). SHR gravity signalling... | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e002085_P001 | SHR, SGR7, Zm00001e002085 | transcription factor (GRAS). SHR gravity signalling... | 0.15 | OrthoFinder output from all 47 species | |
| Zm00001e035411_P001 | SHR, SGR7, Zm00001e035411 | transcription factor (GRAS). SHR gravity signalling... | 0.11 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| MF | GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | IEP | HCCA |
| MF | GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| MF | GO:0046983 | protein dimerization activity | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| MF | GO:0051287 | NAD binding | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR005202 | TF_GRAS | 189 | 602 |
| No external refs found! |
